#! /bin/sh # # Copyright by The HDF Group. # Copyright by the Board of Trustees of the University of Illinois. # All rights reserved. # # This file is part of HDF5. The full HDF5 copyright notice, including # terms governing use, modification, and redistribution, is contained in # the COPYING file, which can be found at the root of the source code # distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. # If you do not have access to either file, you may request a copy from # help@hdfgroup.org. # # Tests for the h5copy tool # # Pedro Vicente Nunes (pvn@hdfgroup.org), Albert Cheng (acheng@hdfgroup.org) # Thursday, July 20, 2006 # srcdir=@srcdir@ # Determine which filters are available USE_FILTER_SZIP="@USE_FILTER_SZIP@" USE_FILTER_DEFLATE="@USE_FILTER_DEFLATE@" # source dirs SRC_TOOLS="$srcdir/.." SRC_TOOLS_TESTFILES="$SRC_TOOLS/testfiles" # testfiles source dirs for tools SRC_H5LS_TESTFILES="$SRC_TOOLS_TESTFILES" SRC_H5DUMP_TESTFILES="$SRC_TOOLS_TESTFILES" SRC_H5DIFF_TESTFILES="$SRC_TOOLS/h5diff/testfiles" SRC_H5COPY_TESTFILES="$SRC_TOOLS/h5copy/testfiles" SRC_H5REPACK_TESTFILES="$SRC_TOOLS/h5repack/testfiles" SRC_H5JAM_TESTFILES="$SRC_TOOLS/h5jam/testfiles" SRC_H5STAT_TESTFILES="$SRC_TOOLS/h5stat/testfiles" SRC_H5IMPORT_TESTFILES="$SRC_TOOLS/h5import/testfiles" TESTNAME=h5copy EXIT_SUCCESS=0 EXIT_FAILURE=1 ###################################################################### # test files # -------------------------------------------------------------------- # All the test files copy from source directory to test directory # NOTE: Keep this framework to add/remove test files. # Any test files from other tools can be used in this framework. # This list are also used for checking exist. # Comment '#' without space can be used. # -------------------------------------------------------------------- # List of files that will be copied over to local test dir LIST_HDF5_TEST_FILES=" $SRC_H5COPY_TESTFILES/h5copytst.h5 $SRC_H5COPY_TESTFILES/h5copy_ref.h5 $SRC_H5COPY_TESTFILES/h5copy_extlinks_src.h5 $SRC_H5COPY_TESTFILES/h5copy_extlinks_trg.h5 " # List of expect files that will be copied over to local test dir LIST_OTHER_TEST_FILES=" $SRC_H5COPY_TESTFILES/h5copy_misc1.out " H5COPY=h5copy # The tool name H5COPY_BIN=`pwd`/$H5COPY # The path of the tool binary H5DIFF=h5diff # The h5diff tool name H5DIFF_BIN=`pwd`/../h5diff/$H5DIFF # The path of the h5diff tool binary H5LS=h5ls # The h5ls tool name H5LS_ARGS=-Svr # Arguments to the h5ls tool H5LS_BIN=`pwd`/../h5ls/$H5LS # The path of the h5ls tool binary RM='rm -rf' CMP='cmp -s' DIFF='diff -c' CP='cp' DIRNAME='dirname' LS='ls' AWK='awk' nerrors=0 verbose=yes h5haveexitcode=yes # default is yes TESTDIR=./testfiles test -d $TESTDIR || mkdir $TESTDIR # RUNSERIAL is used. Check if it can return exit code from executalbe correctly. if [ -n "$RUNSERIAL_NOEXITCODE" ]; then echo "***Warning*** Serial Exit Code is not passed back to shell corretly." echo "***Warning*** Exit code checking is skipped." h5haveexitcode=no fi # # copy test files and expected output files from source dirs to test dir # COPY_TESTFILES="$LIST_HDF5_TEST_FILES $LIST_OTHER_TEST_FILES" COPY_TESTFILES_TO_TESTDIR() { # copy test files. Used -f to make sure get a new copy for tstfile in $COPY_TESTFILES do # ignore '#' comment echo $tstfile | tr -d ' ' | grep '^#' > /dev/null RET=$? if [ $RET -eq 1 ]; then # skip cp if srcdir is same as destdir # this occurs when build/test performed in source dir and # make cp fail SDIR=`$DIRNAME $tstfile` INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then $CP -f $tstfile $TESTDIR if [ $? -ne 0 ]; then echo "Error: FAILED to copy $tstfile ." # Comment out this to CREATE expected file exit $EXIT_FAILURE fi fi fi done } CLEAN_TESTFILES_AND_TESTDIR() { # skip rm if srcdir is same as destdir # this occurs when build/test performed in source dir and # make cp fail SDIR=$SRC_H5COPY_TESTFILES INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then $RM $TESTDIR fi } # Print a "SKIP" message SKIP() { TESTING $H5COPY $@ echo " -SKIP-" } # Print a line-line message left justified in a field of 70 characters # beginning with the word "Testing". TESTING() { SPACES=" " echo "Testing $* $SPACES" |cut -c1-70 |tr -d '\012' } # Print a line-line message left justified in a field of 70 characters # beginning with the word "Verifying". # VERIFY() { SPACES=" " echo "Verifying h5diff output $* $SPACES" | cut -c1-70 | tr -d '\012' } # Print a line-line message left justified in a field of 70 characters # beginning with the word "Verifying". # VERIFY_OUTPUT() { SPACES=" " echo "Verifying output files $* $SPACES" | cut -c1-70 | tr -d '\012' } # Source in the output filter function definitions. . $srcdir/../../bin/output_filter.sh # Run a test and print PASS or *FAIL*. If h5copy can complete # with exit status 0, consider it pass. If a test fails then increment # the `nerrors' global variable. # Assumed arguments: # $1 is -i # $2 is input file # $3 is -o # $4 is output file # $* everything else arguments for h5copy. TOOLTEST() { actualout="$TESTDIR/tooltest.actualout" actualerr="$TESTDIR/tooltest.actualerr" runh5diff=yes if [ "$1" = -i ]; then inputfile=$2 else if [ "$1" = -f ]; then inputfile=$4 else inputfile=$3 fi runh5diff=no fi if [ "$3" = -o ]; then outputfile=$4 else if [ "$1" = -f ]; then outputfile=$6 else outputfile=$5 fi runh5diff=no fi TESTING $H5COPY $@ ( echo "#############################" echo " output for '$H5COPY $@'" echo "#############################" $RUNSERIAL $H5COPY_BIN $@ ) > $actualout 2> $actualerr RET=$? if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" cat $actualout nerrors="`expr $nerrors + 1`" else echo " PASSED" if [ $runh5diff != no ]; then H5DIFFTEST $inputfile $outputfile $7 $9 fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then rm -f $actualout $actualerr $outputfile fi fi } # TOOLTEST back-to-back TOOLTEST_PREFILL() { actualout="$TESTDIR/tooltest.actualout" actualerr="$TESTDIR/tooltest.actualerr" runh5diff=yes if [ "$1" = -i ]; then inputfile=$2 else runh5diff=no fi if [ "$3" = -o ]; then outputfile=$4 else runh5diff=no fi grp_name=$5 grp_name2=$6 obj_name=$7 obj_name2=$8 TESTING $H5COPY $@ ( echo "#############################" echo " output for '$H5COPY $@'" echo "#############################" $RUNSERIAL $H5COPY_BIN -i $inputfile -o $outputfile -v -s $grp_name -d $grp_name2 ) > $actualout 2> $actualerr RET=$? if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" cat $actualout nerrors="`expr $nerrors + 1`" else TESTING $H5COPY $@ ( echo "#############################" echo " output for '$H5COPY $@'" echo "#############################" $RUNSERIAL $H5COPY_BIN -i $inputfile -o $outputfile -v -s $obj_name -d $obj_name2 ) > $actualout 2> $actualerr RET=$? if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" cat $actualout nerrors="`expr $nerrors + 1`" else echo " PASSED" if [ $runh5diff != no ]; then H5DIFFTEST $inputfile $outputfile $obj_name $obj_name2 fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then rm -f $actualout $actualerr $outputfile fi fi fi } # TOOLTEST back-to-back TOOLTEST_SAME() { actualout="$TESTDIR/tooltest.actualout" actualerr="$TESTDIR/tooltest.actualerr" runh5diff=yes if [ "$1" = -i ]; then inputfile=$2 else runh5diff=no fi if [ "$3" = -o ]; then outputfile=$4 else runh5diff=no fi grp_name=$5 grp_name2=$6 TESTING $H5COPY $@ ( echo "#############################" echo " output for '$H5COPY $@'" echo "#############################" $RUNSERIAL $H5COPY_BIN -i $inputfile -o $outputfile -v -s $grp_name -d $grp_name ) > $actualout 2> $actualerr RET=$? if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" cat $actualout nerrors="`expr $nerrors + 1`" else TESTING $H5COPY $@ ( echo "#############################" echo " output for '$H5COPY $@'" echo "#############################" $RUNSERIAL $H5COPY_BIN -i $outputfile -o $outputfile -v -s $grp_name -d $grp_name2 ) > $actualout 2> $actualerr RET=$? if [ $RET != 0 ]; then echo "*FAILED*" echo "failed result is:" cat $actualout nerrors="`expr $nerrors + 1`" else echo " PASSED" if [ $runh5diff != no ]; then H5DIFFTEST $outputfile $outputfile $grp_name $grp_name2 fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then rm -f $actualout $actualerr $outputfile fi fi fi } # Compare the two text files # PASS if same # FAIL if different, and show the diff # # Assumed arguments: # $1 is text file1 (expected output) # $2 is text file2 (actual output) CMP_OUTPUT() { expect=$1 actual=$2 VERIFY_OUTPUT $@ if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. echo " CREATED" cp $actual $expect echo " Expected result (*.ddl) missing" nerrors="`expr $nerrors + 1`" elif $CMP $expect $actual; then echo " PASSED" else echo "*FAILED*" echo " Expected output differs from actual output" nerrors="`expr $nerrors + 1`" test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' fi } TOOLTEST_FAIL() { expectout="$TESTDIR/$1" actualout="$TESTDIR/$1.actualout" actualerr="$TESTDIR/$1.actualerr" actualout_sav=${actualout}-sav actualerr_sav=${actualerr}-sav shift if [ "$1" = -i ]; then inputfile=$2 fi if [ "$3" = -o ]; then outputfile=$4 fi TESTING $H5COPY $@ ( #echo "#############################" #echo " output for '$H5COPY $@'" #echo "#############################" $RUNSERIAL $H5COPY_BIN $@ ) > $actualout 2> $actualerr RET=$? # save actualout and actualerr in case they are needed later. cp $actualout $actualout_sav STDOUT_FILTER $actualout cp $actualerr $actualerr_sav STDERR_FILTER $actualerr if [ $RET != 0 ]; then echo " PASSED" # Verifying output text from h5copy if [ "$expectout" != "SKIP" ]; then # combine stderr to stdout to compare the output at once. # We may seperate stdout and stderr later. cat $actualerr >> $actualout CMP_OUTPUT $expectout $actualout fi else echo "*FAILED*" echo "failed result is:" cat $actualout nerrors="`expr $nerrors + 1`" fi # Clean up output file if test -z "$HDF5_NOCLEANUP"; then rm -f $actualout $actualerr $actualout_sav $actualerr_sav $outputfile fi } # Call the h5diff tool # H5DIFFTEST() { VERIFY $@ $RUNSERIAL $H5DIFF_BIN -q "$@" RET=$? if [ $RET != 0 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" else echo " PASSED" fi } # Call the h5diff tool with a call that is expected to fail # H5DIFFTEST_FAIL() { VERIFY $@ $RUNSERIAL $H5DIFF_BIN -q "$@" RET=$? if [ $h5haveexitcode = 'yes' -a $RET != 1 ] ; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" else echo " PASSED" fi } # Copy single datasets of various forms from one group to another, # adding object copied to the destination file each time # # Assumed arguments: # COPY_OBJECTS() { TESTFILE="$TESTDIR/h5copytst.h5" echo "Test copying various forms of datasets" TOOLTEST -i $TESTFILE -o $TESTDIR/simple.out.h5 -v -s simple -d simple TOOLTEST -i $TESTFILE -o $TESTDIR/chunk.out.h5 -v -s chunk -d chunk TOOLTEST -i $TESTFILE -o $TESTDIR/compact.out.h5 -v -s compact -d compact TOOLTEST -i $TESTFILE -o $TESTDIR/compound.out.h5 -v -s compound -d compound if test $USE_FILTER_DEFLATE = "yes" ; then TOOLTEST -i $TESTFILE -o $TESTDIR/compressed.out.h5 -v -s compressed -d compressed fi TOOLTEST -i $TESTFILE -o $TESTDIR/named_vl.out.h5 -v -s named_vl -d named_vl TOOLTEST -i $TESTFILE -o $TESTDIR/nested_vl.out.h5 -v -s nested_vl -d nested_vl TOOLTEST -i $TESTFILE -o $TESTDIR/dset_attr.out.h5 -v -s /dset_attr -d /dset_attr echo "Test copying dataset within group in source file to root of destination" TOOLTEST -i $TESTFILE -o $TESTDIR/simple_top.out.h5 -v -s grp_dsets/simple -d simple_top echo "Test copying & renaming dataset" TOOLTEST -i $TESTFILE -o $TESTDIR/dsrename.out.h5 -v -s compound -d rename echo "Test copying empty, 'full' & 'nested' groups" if test $USE_FILTER_DEFLATE = "yes" ; then TOOLTEST -i $TESTFILE -o $TESTDIR/grp_empty.out.h5 -v -s grp_empty -d grp_empty fi TOOLTEST -i $TESTFILE -o $TESTDIR/grp_dsets.out.h5 -v -s grp_dsets -d grp_dsets TOOLTEST -i $TESTFILE -o $TESTDIR/grp_nested.out.h5 -v -s grp_nested -d grp_nested TOOLTEST -i $TESTFILE -o $TESTDIR/grp_attr.out.h5 -v -s grp_attr -d grp_attr if test $USE_FILTER_DEFLATE = "yes" ; then echo "Test copying dataset within group in source file to group in destination" TOOLTEST_PREFILL -i $TESTFILE -o $TESTDIR/simple_group.out.h5 grp_dsets grp_dsets /grp_dsets/simple /grp_dsets/simple_group echo "Test copying & renaming group" TOOLTEST -i $TESTFILE -o $TESTDIR/grp_rename.out.h5 -v -s grp_dsets -d grp_rename fi echo "Test copying 'full' group hierarchy into group in destination file" TOOLTEST_PREFILL -i $TESTFILE -o $TESTDIR/grp_dsets_rename.out.h5 grp_dsets grp_rename grp_dsets /grp_rename/grp_dsets echo "Test copying objects into group hier. that doesn't exist yet in destination file" TOOLTEST -i $TESTFILE -o $TESTDIR/A_B1_simple.out.h5 -vp -s simple -d /A/B1/simple TOOLTEST -i $TESTFILE -o $TESTDIR/A_B2_simple2.out.h5 -vp -s simple -d /A/B2/simple2 TOOLTEST -i $TESTFILE -o $TESTDIR/C_D_simple.out.h5 -vp -s /grp_dsets/simple -d /C/D/simple if test $USE_FILTER_DEFLATE = "yes" ; then TOOLTEST -i $TESTFILE -o $TESTDIR/E_F_grp_dsets.out.h5 -vp -s /grp_dsets -d /E/F/grp_dsets TOOLTEST -i $TESTFILE -o $TESTDIR/G_H_grp_nested.out.h5 -vp -s /grp_nested -d /G/H/grp_nested fi } # Copy references in various way. # # Assumed arguments: # COPY_REFERENCES() { TESTFILE="$TESTDIR/h5copy_ref.h5" echo "Test copying object and region references" TOOLTEST -f ref -i $TESTFILE -o $TESTDIR/region_ref.out.h5 -v -s / -d /COPY } # Copy external links. # adding to the destination file each time compare the result # # Assumed arguments: # COPY_EXT_LINKS() { TESTFILE="$TESTDIR/h5copy_extlinks_src.h5" echo "Test copying external link directly without -f ext" TOOLTEST -v -i $TESTFILE -o $TESTDIR/ext_link.out.h5 -s /group_ext/extlink_dset -d /copy1_dset echo "Test copying external link directly with -f ext" TOOLTEST -f ext -i $TESTFILE -o $TESTDIR/ext_link_f.out.h5 -v -s /group_ext/extlink_dset -d /copy2_dset echo "Test copying dangling external link (no obj) directly without -f ext" TOOLTEST -v -i $TESTFILE -o $TESTDIR/ext_dangle_noobj.out.h5 -s /group_ext/extlink_notyet1 -d /copy_dangle1_1 echo "Test copying dangling external link (no obj) directly with -f ext" TOOLTEST -f ext -i $TESTFILE -o $TESTDIR/ext_dangle_noobj_f.out.h5 -v -s /group_ext/extlink_notyet1 -d /copy_dangle1_2 echo "Test copying dangling external link (no file) directly without -f ext" TOOLTEST -v -i $TESTFILE -o $TESTDIR/ext_dangle_nofile.out.h5 -s /group_ext/extlink_notyet2 -d /copy_dangle2_1 echo "Test copying dangling external link (no file) directly with -f ext" TOOLTEST -f ext -i $TESTFILE -o $TESTDIR/ext_dangle_nofile_f.out.h5 -v -s /group_ext/extlink_notyet2 -d /copy_dangle2_2 echo "Test copying a group contains external links without -f ext" TOOLTEST -v -i $TESTFILE -o $TESTDIR/ext_link_group.out.h5 -s /group_ext -d /copy1_group echo "Test copying a group contains external links with -f ext" TOOLTEST -f ext -i $TESTFILE -o $TESTDIR/ext_link_group_f.out.h5 -v -s /group_ext -d /copy2_group } # Test misc. # # Assumed arguments: # TEST_MISC() { TESTFILE="$TESTDIR/h5copytst.h5" echo "Test copying object into group which doesn't exist, without -p" TOOLTEST_FAIL h5copy_misc1.out -i $TESTFILE -o $TESTDIR/h5copy_misc1.out.h5 -v -s /simple -d /g1/g2/simple echo "Test copying objects to the same file " TOOLTEST_SAME -i $TESTFILE -o $TESTDIR/samefile1.out.h5 /simple /simple_cp if test $USE_FILTER_DEFLATE = "yes" ; then TOOLTEST_SAME -i $TESTFILE -o $TESTDIR/samefile2.out.h5 /grp_dsets /grp_dsets_cp fi } ############################################################################## ### T H E T E S T S ### ############################################################################## # prepare for test COPY_TESTFILES_TO_TESTDIR # Start tests COPY_OBJECTS COPY_REFERENCES COPY_EXT_LINKS TEST_MISC # Clean up temporary files/directories CLEAN_TESTFILES_AND_TESTDIR if test $nerrors -eq 0 ; then echo "All $TESTNAME tests passed." exit $EXIT_SUCCESS else echo "$TESTNAME tests failed with $nerrors errors." exit $EXIT_FAILURE fi