|
BioHDF version 0.3 alpha
Scalable NGS Data Storage Based on HDF5
|
biohdf_utility.h
00001 /***************************************************************************** 00002 * Copyright by The HDF Group * 00003 * All rights reserved. * 00004 * * 00005 * This file is part of BioHDF. The full BioHDF copyright notice, including * 00006 * terms governing use, modification, and redistribution, is contained in * 00007 * the file COPYING. COPYING can be found at the root of the source code * 00008 * distribution tree. If you do not have access to this file, you may * 00009 * request a copy from help@hdfgroup.org. * 00010 *****************************************************************************/ 00011 00018 #ifndef _BIOHDF_UTILITY_H 00019 #define _BIOHDF_UTILITY_H 00020 00021 #include "biohdf_api.h" 00022 #include "biohdf_error.h" 00023 00024 00025 00026 /***************************************************************************** 00027 * Destroy BioHDF memory (utility function) * 00028 *****************************************************************************/ 00029 00030 00031 00041 BIOHDF_API biohdf_error 00042 BIOHDFfree_memory(/*IN-OUT*/ void **buffer); 00043 00044 00045 00046 /***************************************************************************** 00047 * Index properties * 00048 *****************************************************************************/ 00049 00056 typedef struct _biohdf_index_creation_properties *biohdf_index_creation_properties; 00057 00058 00059 00061 BIOHDF_API biohdf_error 00062 BIOHDFcreate_index_creation_properties(/*OUT*/ biohdf_index_creation_properties *props); 00063 00064 00065 00067 BIOHDF_API biohdf_error 00068 BIOHDFdestroy_index_creation_properties(/*OUT*/ biohdf_index_creation_properties *props); 00069 00070 00071 00073 BIOHDF_API biohdf_error 00074 BIOHDFset_index_creation_properties_max_memory_mb(biohdf_index_creation_properties props, 00075 int64_t max_memory_to_use_mb); 00076 00077 00078 00080 BIOHDF_API biohdf_error 00081 BIOHDFset_index_creation_properties_temp_path(biohdf_index_creation_properties props, 00082 char *path); 00083 00084 00085 00091 #endif
