# Index

A B C D E F G H I L M N O P R S T U V W Z
All Classes|All Packages|Constant Field Values|Deprecated API|Serialized Form

## A

addAttribute(HObject) - Method in class hdf.view.MetaDataView.DefaultBaseMetaDataView
addAttribute(HObject) - Method in interface hdf.view.MetaDataView.MetaDataView
  Add an attribute to a data object.
addDataView(DataView) - Method in interface hdf.view.DataView.DataViewManager
  Data content is displayed, add the dataview to the main windows
addDataView(DataView) - Method in class hdf.view.HDFView
addExtension(String) - Method in class hdf.view.DefaultFileFilter
  Adds a filetype "dot" extension to filter against.
addFileExtension(String) - Static method in class hdf.object.FileFormat
  Adds file extension(s) to the list of file extensions for supported file formats.
addFileFormat(String, FileFormat) - Static method in class hdf.object.FileFormat
  Adds a FileFormat with specified key to the list of supported formats.
addFilteredImageValue(Number) - Method in class hdf.object.ScalarDS
  Add a value that will be filtered out in an image.
addObject(HObject, Group) - Method in class hdf.view.TreeView.DefaultTreeView
  Adds an already created HObject to the tree under the TreeItem containing the specified parent group.
addObject(HObject, Group) - Method in interface hdf.view.TreeView.TreeView
  Adds an already created HObject to the tree under the TreeItem containing the specified parent group.
addObjectSpecificContent() - Method in class hdf.view.MetaDataView.DefaultBaseMetaDataView
addObjectSpecificContent() - Method in class hdf.view.MetaDataView.DefaultDatasetMetaDataView
addObjectSpecificContent() - Method in class hdf.view.MetaDataView.DefaultDatatypeMetaDataView
addObjectSpecificContent() - Method in class hdf.view.MetaDataView.DefaultGroupMetaDataView
addObjectSpecificContent() - Method in class hdf.view.MetaDataView.DefaultLinkMetaDataView
addToMemberList(HObject) - Method in class hdf.object.Group
  Adds an object to the member list of this group in memory.
allocateArray(long, int) - Static method in class hdf.object.fits.FitsDatatype
  Allocate an one-dimensional array of byte, short, int, long, float, double, or String to store data retrieved from an fits file based on the given fits datatype and dimension sizes.
allocateArray(long, int) - Static method in class hdf.object.h4.H4Datatype
  Allocate a 1D array large enough to hold a multidimensional array of 'datasize' elements of 'datatype' numbers.
allocateArray(H5Datatype, int) - Static method in class hdf.object.h5.H5Datatype
  Allocates a one-dimensional array of byte, short, int, long, float, double, or String to store data in memory.
allocateArray(DataType, int) - Static method in class hdf.object.nc2.NC2Datatype
  Allocate an one-dimensional array of byte, short, int, long, float, double, or String to store data retrieved from an NetCDF3 file based on the given NetCDF3 datatype and dimension sizes.
AND - Enum constant in enum class hdf.view.ViewProperties.BITMASK_OP
applyBitmask(Object, BitSet, ViewProperties.BITMASK_OP) - Static method in class hdf.view.Tools
  Apply bitmask to a data array.
arrayDims - Variable in class hdf.object.Datatype
  The dimensions of the ARRAY element of an ARRAY datatype.
arrayLengthLabel - Variable in class hdf.view.dialog.NewDataObjectDialog
Attribute - Class in hdf.object
  An attribute is a (name, value) pair of metadata attached to a primary data object such as a dataset, group or named datatype.
Attribute(HObject, String, Datatype, long[]) - Constructor for class hdf.object.Attribute
  Create an attribute with specified name, data type and dimension sizes.
Attribute(HObject, String, Datatype, long[], Object) - Constructor for class hdf.object.Attribute
  Create an attribute with specific name and value.
attributeInfoPane - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView
attributeList - Variable in class hdf.object.h5.H5Group
  The list of attributes of this data object.
autoContrastApply(Object, Object, double[], double[], boolean) - Static method in class hdf.view.Tools
  Apply autocontrast parameters to the original data in place (destructive)
autoContrastCompute(Object, double[], boolean) - Static method in class hdf.view.Tools
  Computes autocontrast parameters (gain equates to contrast and bias equates to brightness) for integers.
autoContrastComputeMinMax(Object, double[]) - Static method in class hdf.view.Tools
  Computes autocontrast parameters by
autoContrastConvertImageBuffer(Object, byte[], boolean) - Static method in class hdf.view.Tools
  Converts image raw data to bytes.

## B

baseType - Variable in class hdf.object.Datatype
  The base datatype of this datatype (null if this datatype is atomic).
bigDecimalToByte(int, int, BigDecimal[]) - Method in class hdf.object.h5.H5Datatype
  Convert from an array of BigDecimal into an array of bytes
bigDecimalToByte(BigDecimal[], int) - Method in class hdf.object.h5.H5Datatype
  Convert from a single BigDecimal object from an array of BigDecimal into an array of bytes
binaryOrder - Variable in class hdf.view.TableView.DefaultBaseTableView
bitmask - Variable in class hdf.view.TableView.DefaultBaseTableView
BITMASK - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY
bitmaskOP - Variable in class hdf.view.TableView.DefaultBaseTableView
BITMASKOP - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY
BORDER - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY
breadthFirstMemberList() - Method in class hdf.object.Group
buildIndexMaps(CompoundDataFormat, List<Datatype>) - Static method in class hdf.view.TableView.DataFactoryUtils
byteToBigDecimal(byte[], int) - Method in class hdf.object.h5.H5Datatype
  Convert 4 bytes from an array of bytes into a single BigDecimal
byteToBigDecimal(int, int, byte[]) - Method in class hdf.object.h5.H5Datatype
  Convert a range from an array of bytes into an array of BigDecimal
byteToString(byte[], int) - Static method in class hdf.object.Dataset
  Converts an array of bytes into an array of Strings for a fixed string dataset.

## C

canonicalToDisplayValue(Object) - Method in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter
cellColIdx - Variable in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter
cellColIdx - Variable in class hdf.view.TableView.DataValidatorFactory.HDFDataValidator
cellLabel - Variable in class hdf.view.TableView.DefaultBaseTableView
cellRowIdx - Variable in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter
cellValueField - Variable in class hdf.view.TableView.DefaultBaseTableView
CHAR - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY
Chart - Class in hdf.view
  ChartView displays a histogram/line chart of selected row/column of table data or image data.
Chart(Shell, String, int, double[][], double[], double[]) - Constructor for class hdf.view.Chart
  Constructs a new ChartView given data and data ranges.
chartP - Variable in class hdf.view.Chart
  Panel that draws plot of data values.
checkBin - Variable in class hdf.view.TableView.DefaultBaseTableView
checkCustomNotation - Variable in class hdf.view.TableView.DefaultBaseTableView
checkEnum - Variable in class hdf.view.TableView.DefaultBaseTableView
checkFixedDataLength - Variable in class hdf.view.TableView.DefaultBaseTableView
  Global variables for GUI components
checkHex - Variable in class hdf.view.TableView.DefaultBaseTableView
checkNewFile(String, String) - Static method in class hdf.view.Tools
  Check and find a non-exist file.
checkScientificNotation - Variable in class hdf.view.TableView.DefaultBaseTableView
checkUnsigned - Variable in class hdf.view.dialog.NewDataObjectDialog
checkValidJavaArrayIndex(long) - Static method in class hdf.view.Tools
  Since Java does not allow array indices to be larger than int type, check the given value to see if it is within the valid range of a Java int.
checkValidValue(Object) - Method in class hdf.view.TableView.DataValidatorFactory.HDFDataValidator
chunkSize - Variable in class hdf.object.Dataset
  The array of dimension sizes for a chunk.
CLASS_ARRAY - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
CLASS_BITFIELD - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
CLASS_CHAR - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
CLASS_COMPOUND - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
CLASS_ENUM - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
CLASS_FLOAT - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
CLASS_INTEGER - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
CLASS_NO_CLASS - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
CLASS_OPAQUE - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
CLASS_REFERENCE - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
CLASS_STRING - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
CLASS_TIME - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
CLASS_VLEN - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
classChoice - Variable in class hdf.view.dialog.NewDataObjectDialog
clear() - Method in class hdf.object.Dataset
  Clears memory held by the dataset, such as the data buffer.
clear() - Method in class hdf.object.Group
  Clears up member list and other resources in memory for the group.
clear() - Method in class hdf.object.h5.H5CompoundDS
clear() - Method in class hdf.object.h5.H5Group
clear() - Method in class hdf.object.h5.H5ScalarDS
clearData() - Method in class hdf.object.Attribute
clearData() - Method in interface hdf.object.DataFormat
  Clears the current data buffer in memory and forces the next read() to load the data from file.
clearData() - Method in class hdf.object.Dataset
  Clears the current data buffer in memory and forces the next read() to load the data from file.
clearData() - Method in class hdf.object.ScalarDS
close() - Method in class hdf.object.FileFormat
  Closes file associated with this instance.
close() - Method in class hdf.object.fits.FitsFile
close() - Method in class hdf.object.h4.H4File
close() - Method in class hdf.object.h5.H5File
  Closes file associated with this H5File instance.
close() - Method in class hdf.object.nc2.NC2File
close(long) - Method in class hdf.object.Attribute
close(long) - Method in class hdf.object.Datatype
  Closes a datatype identifier.
close(long) - Method in class hdf.object.fits.FitsDataset
close(long) - Method in class hdf.object.fits.FitsDatatype
close(long) - Method in class hdf.object.fits.FitsGroup
  close group access
close(long) - Method in class hdf.object.h4.H4Attribute
close(long) - Method in class hdf.object.h4.H4Datatype
close(long) - Method in class hdf.object.h4.H4GRImage
close(long) - Method in class hdf.object.h4.H4Group
  close group access.
close(long) - Method in class hdf.object.h4.H4SDS
close(long) - Method in class hdf.object.h4.H4Vdata
close(long) - Method in class hdf.object.h5.H5Attribute
close(long) - Method in class hdf.object.h5.H5CompoundDS
close(long) - Method in class hdf.object.h5.H5Datatype
  Closes a datatype identifier.
close(long) - Method in class hdf.object.h5.H5Group
close(long) - Method in class hdf.object.h5.H5Link
close(long) - Method in class hdf.object.h5.H5ScalarDS
close(long) - Method in class hdf.object.HObject
  Closes access to the object.
close(long) - Method in class hdf.object.nc2.NC2Attribute
close(long) - Method in class hdf.object.nc2.NC2Dataset
close(long) - Method in class hdf.object.nc2.NC2Datatype
close(long) - Method in class hdf.object.nc2.NC2Group
closeFile(FileFormat) - Method in class hdf.view.HDFView
closeFile(FileFormat) - Method in class hdf.view.TreeView.DefaultTreeView
  Close a file
closeFile(FileFormat) - Method in interface hdf.view.TreeView.TreeView
  close a file
CMPD_START_IDX_MAP_INDEX - Static variable in class hdf.view.TableView.DataFactoryUtils
COL_TO_BASE_CLASS_MAP_INDEX - Static variable in class hdf.view.TableView.DataFactoryUtils
colCount - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
ColumnHeader(IUniqueIndexLayer, ILayer, SelectionLayer) - Constructor for class hdf.view.TableView.DefaultBaseTableView.ColumnHeader
columnHeaderDataProvider - Variable in class hdf.view.TableView.DefaultBaseTableView
CompoundDataFormat - Interface in hdf.object
  An interface that provides general operations for data with a Compound datatype.
CompoundDS - Class in hdf.object
  A CompoundDS is a dataset with compound datatype.
CompoundDS(FileFormat, String, String) - Constructor for class hdf.object.CompoundDS
  Constructs a CompoundDS object with the given file, dataset name and path.
CompoundDS(FileFormat, String, String, long[]) - Constructor for class hdf.object.CompoundDS
  Deprecated.
  Not for public use in the future.
  Using `CompoundDS(FileFormat, String, String)`
compoundMemberNames - Variable in class hdf.object.Datatype
  The list of names of members of a compound Datatype.
compoundMemberOffsets - Variable in class hdf.object.Datatype
  The list of offsets of members of a compound Datatype.
compoundMemberTypes - Variable in class hdf.object.Datatype
  The list of types of members of a compound Datatype.
compression - Variable in class hdf.object.Dataset
  The compression information.
COMPRESSION_GZIP_TXT - Static variable in class hdf.object.Dataset
computeStatistics(Object, double[], Object) - Static method in class hdf.view.Tools
  Computes mean and standard deviation of a data array
configureUiBindings(UiBindingRegistry) - Method in class hdf.view.TableView.DefaultBaseTableView.RefContextMenu
contentTabFolder - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView
convertAttribute(HObject, Attribute) - Static method in class hdf.object.nc2.NC2File
convertBigDecimalToByte(BigDecimal) - Method in class hdf.object.h5.H5Datatype
  Convert a BigDecimal to a byte array .
CONVERTBYTE - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY
convertByteToBigDecimal(byte[]) - Method in class hdf.object.h5.H5Datatype
  Convert byte array data to a BigDecimal.
convertByteToString - Variable in class hdf.object.Dataset
  Flag to indicate if the byte[] array is converted to strings
convertCompoundByteMember(byte[], long, long, long) - Method in class hdf.object.Attribute
  Given an array of bytes representing a compound Datatype and a start index and length, converts len number of bytes into the correct Object type and returns it.
convertCompoundByteMember(byte[], long, long, long) - Method in class hdf.object.h5.H5Attribute
  Given an array of bytes representing a compound Datatype and a start index and length, converts len number of bytes into the correct Object type and returns it.
convertedBuf - Variable in class hdf.object.Dataset
  The array that holds the converted data of unsigned C-type integers.
convertEnumNameToValue(String[]) - Method in class hdf.object.h5.H5Datatype
  Converts names in an Enumeration Datatype to values.
convertEnumValueToName(Object) - Method in class hdf.object.h5.H5Datatype
  Converts values in an Enumeration Datatype to names.
convertFromUnsignedC() - Method in class hdf.object.Attribute
  Converts the data values of this Attribute to appropriate Java integers if they are unsigned integers.
convertFromUnsignedC() - Method in interface hdf.object.DataFormat
  Converts the data values of this data object to appropriate Java integers if they are unsigned integers.
convertFromUnsignedC() - Method in class hdf.object.h4.H4Vdata
convertFromUnsignedC() - Method in class hdf.object.h5.H5CompoundDS
convertFromUnsignedC() - Method in class hdf.object.ScalarDS
  Converts the data values of this dataset to appropriate Java integer if they are unsigned integers.
convertFromUnsignedC(Object) - Static method in class hdf.object.Dataset
  Deprecated.
  Not for public use in the future.
  Using `Dataset.convertFromUnsignedC(Object, Object)`
convertFromUnsignedC(Object, Object) - Static method in class hdf.object.Dataset
  Converts one-dimension array of unsigned C-type integers to a new array of appropriate Java integer in memory.
convertImageToHDF(String, String, String, String) - Static method in class hdf.view.Tools
  Converts an image file into HDF4/5 file.
convertToUnsignedC() - Method in class hdf.object.Attribute
  Converts Java integer data values of this Attribute back to unsigned C-type integer data if they are unsigned integers.
convertToUnsignedC() - Method in interface hdf.object.DataFormat
  Converts Java integer data values of this data object back to unsigned C-type integer data if they are unsigned integers.
convertToUnsignedC() - Method in class hdf.object.h4.H4Vdata
convertToUnsignedC() - Method in class hdf.object.h5.H5CompoundDS
convertToUnsignedC() - Method in class hdf.object.ScalarDS
  Converts Java integer data of this dataset back to unsigned C-type integer data if they are unsigned integers.
convertToUnsignedC(Object) - Static method in class hdf.object.Dataset
  Deprecated.
  Not for public use in the future.
  Using `Dataset.convertToUnsignedC(Object, Object)`
convertToUnsignedC(Object, Object) - Static method in class hdf.object.Dataset
  Converts the array of converted unsigned integers back to unsigned C-type integer data in memory.
convertUINT64toBigInt(Long) - Static method in class hdf.view.Tools
  Converts unsigned 64-bit integer data to a BigInteger since Java does not have unsigned types.
copy(Group, String, long[], Object) - Method in class hdf.object.Attribute
copy(Group, String, long[], Object) - Method in class hdf.object.CompoundDS
  Deprecated.
  Not implemented for compound dataset.
copy(Group, String, long[], Object) - Method in class hdf.object.Dataset
  Creates a new dataset and writes the data buffer to the new dataset.
copy(Group, String, long[], Object) - Method in class hdf.object.fits.FitsDataset
copy(Group, String, long[], Object) - Method in class hdf.object.h4.H4GRImage
copy(Group, String, long[], Object) - Method in class hdf.object.h4.H4SDS
copy(Group, String, long[], Object) - Method in class hdf.object.h4.H4Vdata
copy(Group, String, long[], Object) - Method in class hdf.object.h5.H5ScalarDS
copy(Group, String, long[], Object) - Method in class hdf.object.nc2.NC2Dataset
copy(HObject, Group) - Method in class hdf.object.FileFormat
  Deprecated.
  As of 2.4, replaced by `FileFormat.copy(HObject, Group, String)`

  To mimic the behavior originally provided by this method, call the replacement method with `null` as the 3rd parameter.

copy(HObject, Group, String) - Method in class hdf.object.FileFormat
  Copies the source object to a new destination.
copy(HObject, Group, String) - Method in class hdf.object.fits.FitsFile
copy(HObject, Group, String) - Method in class hdf.object.h4.H4File
  Copy an object to a group.
copy(HObject, Group, String) - Method in class hdf.object.h5.H5File
copy(HObject, Group, String) - Method in class hdf.object.nc2.NC2File
copyAttributes(int, int) - Method in class hdf.object.nc2.NC2File
copyAttributes(long, long) - Method in class hdf.object.fits.FitsFile
copyAttributes(long, long) - Static method in class hdf.object.h5.H5File
  Copies the attributes of one object to another object.
copyAttributes(HObject, HObject) - Method in class hdf.object.fits.FitsFile
copyAttributes(HObject, HObject) - Static method in class hdf.object.h5.H5File
  Copies the attributes of one object to another object.
copyAttributes(HObject, HObject) - Method in class hdf.object.nc2.NC2File
create() - Method in class hdf.view.dialog.UserOptionsDialog
create(String) - Method in class hdf.object.FileFormat
  Deprecated.
  As of 2.4, replaced by `FileFormat.createFile(String, int)`

  The replacement method has an additional parameter that controls the behavior if the file already exists. Use `FileFormat.FILE_CREATE_DELETE` as the second argument in the replacement method to mimic the behavior originally provided by this method.

create(String, Group) - Static method in class hdf.object.fits.FitsGroup
  Creates a new group.
create(String, Group) - Static method in class hdf.object.h4.H4Group
  Creates a new group.
create(String, Group) - Static method in class hdf.object.nc2.NC2Group
  Creates a new group.
create(String, Group, long...) - Static method in class hdf.object.h5.H5Group
  Creates a new group with a name in a group and with the group creation properties specified in gplist.
create(String, Group, long[], long[], long[], int, String[], Datatype[], int[], long[][], Object) - Static method in class hdf.object.h5.H5CompoundDS
  Creates a simple compound dataset in a file with/without chunking and compression.
create(String, Group, long[], String[], Datatype[], int[], long[][], Object) - Static method in class hdf.object.h5.H5CompoundDS
  Deprecated.
  Not for public use in the future.
  Using `H5CompoundDS.create(String, Group, long[], long[], long[], int, String[], Datatype[], int[], long[][], Object)`
create(String, Group, long[], String[], Datatype[], int[], Object) - Static method in class hdf.object.h5.H5CompoundDS
  Deprecated.
  Not for public use in the future.
  Using `H5CompoundDS.create(String, Group, long[], long[], long[], int, String[], Datatype[], int[], long[][], Object)`
create(String, Group, Datatype, long[], long[], long[], int, int, int, Object) - Static method in class hdf.object.h4.H4GRImage
  Creates a new image.
create(String, Group, Datatype, long[], long[], long[], int, Object) - Static method in class hdf.object.fits.FitsDataset
  Creates a new dataset.
create(String, Group, Datatype, long[], long[], long[], int, Object) - Static method in class hdf.object.h4.H4SDS
create(String, Group, Datatype, long[], long[], long[], int, Object) - Static method in class hdf.object.h5.H5ScalarDS
create(String, Group, Datatype, long[], long[], long[], int, Object) - Static method in class hdf.object.nc2.NC2Dataset
  Creates a new dataset.
create(String, Group, Datatype, long[], long[], long[], int, Object, Object) - Static method in class hdf.object.h4.H4SDS
  Creates a new dataset.
create(String, Group, Datatype, long[], long[], long[], int, Object, Object) - Static method in class hdf.object.h5.H5ScalarDS
  Creates a scalar dataset in a file with/without chunking and compression.
CREATE - Static variable in class hdf.object.FileFormat
  File access flag for creating/truncating with read-write permission.
createCompoundDS(String, Group, long[], long[], long[], int, String[], Datatype[], int[], Object) - Method in class hdf.object.FileFormat
  Creates a new compound dataset in a file with/without chunking and compression.
createCompoundDS(String, Group, long[], long[], long[], int, String[], Datatype[], int[], Object) - Method in class hdf.object.h5.H5File
createCompoundDS(String, Group, long[], String[], Datatype[], int[], Object) - Method in class hdf.object.FileFormat
  Deprecated.
  As of 2.4, replaced by `FileFormat.createCompoundDS(String, Group, long[], long[], long[], int, String[], Datatype[], int[], Object)`

  The replacement method has additional parameters: `maxdims, chunks,` and `gzip`. To mimic the behavior originally provided by this method, call the replacement method with the following parameter list: `( name, pgroup, dims, null, null, -1, memberNames, memberDatatypes, memberSizes, data );`

createCompoundFieldType(String) - Method in class hdf.object.h5.H5Datatype
  Creates a datatype of a compound with one field.
createContents(Composite) - Method in class hdf.view.dialog.UserOptionsGeneralPage
  Creates and returns the SWT control for the customized body of this preference page under the given parent composite.
createContents(Composite) - Method in class hdf.view.dialog.UserOptionsHDFPage
  Creates and returns the SWT control for the customized body of this preference page under the given parent composite.
createContents(Composite) - Method in class hdf.view.dialog.UserOptionsViewModulesPage
  Creates and returns the SWT control for the customized body of this preference page under the given parent composite.
createControl(Composite) - Method in class hdf.view.dialog.UserOptionsDefaultPage
createDatatype(int, int, int, int) - Method in class hdf.object.FileFormat
  Creates a new datatype in memory.
createDatatype(int, int, int, int) - Method in class hdf.object.fits.FitsFile
createDatatype(int, int, int, int) - Method in class hdf.object.h4.H4File
createDatatype(int, int, int, int) - Method in class hdf.object.h5.H5File
  Methods related to Datatypes and HObjects in HDF5 Files.
createDatatype(int, int, int, int) - Method in class hdf.object.nc2.NC2File
createDatatype(int, int, int, int, Datatype) - Method in class hdf.object.FileFormat
  Creates a new datatype in memory.
createDatatype(int, int, int, int, Datatype) - Method in class hdf.object.h4.H4File
createDatatype(int, int, int, int, Datatype) - Method in class hdf.object.h5.H5File
createDatatype(int, int, int, int, Datatype) - Method in class hdf.object.nc2.NC2File
createDatatypeWidget() - Method in class hdf.view.dialog.NewDataObjectDialog
createFile(String, int) - Method in class hdf.object.FileFormat
  Creates a file with the specified name and returns a new FileFormat implementation instance associated with the file.
createFile(String, int) - Method in class hdf.object.h4.H4File
  Creates an HDF4 file with the specified name and returns a new H4File instance associated with the file.
createFile(String, int) - Method in class hdf.object.h5.H5File
  Creates an HDF5 file with the specified name and returns a new H5File instance associated with the file.
createFullname(String, String) - Method in class hdf.object.HObject
createGcpl(int, int, int) - Method in class hdf.object.FileFormat
  Creates the group creation property list identifier, gcpl.
createGcpl(int, int, int) - Method in class hdf.object.h5.H5File
  Creates the group creation property list identifier, gcpl.
createGrayPalette() - Static method in class hdf.view.Tools
  Creates the gray palette of the indexed 256-color table.
createGrayWavePalette() - Static method in class hdf.view.Tools
  Creates the gray wave palette of the indexed 256-color table.
createGroup(String, Group) - Method in class hdf.object.FileFormat
  Creates a new group with specified name in existing group.
createGroup(String, Group) - Method in class hdf.object.fits.FitsFile
createGroup(String, Group) - Method in class hdf.object.h4.H4File
createGroup(String, Group) - Method in class hdf.object.h5.H5File
  Creates a new group with specified name in existing group.
createGroup(String, Group) - Method in class hdf.object.nc2.NC2File
createGroup(String, Group, long...) - Method in class hdf.object.FileFormat
  Creates a new group with specified name in existing group.
createGroup(String, Group, long...) - Method in class hdf.object.h5.H5File
  Creates a new group with specified name in existing group and with the group creation properties list, gplist.
createImage(String, Group, Datatype, long[], long[], long[], int, int, int, Object) - Method in class hdf.object.FileFormat
  Creates a new image in a file.
createImage(String, Group, Datatype, long[], long[], long[], int, int, int, Object) - Method in class hdf.object.fits.FitsFile
createImage(String, Group, Datatype, long[], long[], long[], int, int, int, Object) - Method in class hdf.object.h4.H4File
createImage(String, Group, Datatype, long[], long[], long[], int, int, int, Object) - Method in class hdf.object.h5.H5File
createImage(String, Group, Datatype, long[], long[], long[], int, int, int, Object) - Method in class hdf.object.nc2.NC2File
createIndexedImage(BufferedImage, byte[], byte[][], long, long) - Static method in class hdf.view.Tools
  Creates a RGB indexed image of 256 colors.
createInstance(String, int) - Method in class hdf.object.FileFormat
  Creates a FileFormat implementation instance with specified filename and access.
createInstance(String, int) - Method in class hdf.object.fits.FitsFile
  Creates a FitsFile instance with specified file name and READ access.
createInstance(String, int) - Method in class hdf.object.h4.H4File
  Creates an H4File instance with specified file name and access.
createInstance(String, int) - Method in class hdf.object.h5.H5File
  Creates an H5File instance with specified file name and access.
createInstance(String, int) - Method in class hdf.object.nc2.NC2File
  Creates a NC2File instance with specified file name and READ access.
createLink(Group, String, HObject, int) - Method in class hdf.object.FileFormat
  Creates a soft, hard or external link to an existing object in the open file.
createLink(Group, String, HObject, int) - Method in class hdf.object.h5.H5File
  Creates a link to an object in the open file.
createLink(Group, String, Object) - Method in class hdf.object.FileFormat
  Creates a link to an existing object in the open file.
createLink(Group, String, Object) - Method in class hdf.object.h5.H5File
createLink(Group, String, String, int) - Method in class hdf.object.FileFormat
  Creates a soft or external link to an object in a file that does not exist at the time the link is created.
createLink(Group, String, String, int) - Method in class hdf.object.h5.H5File
  Creates a soft or external link to object in a file that does not exist at the time the link is created.
createMenuBar(Shell) - Method in class hdf.view.TableView.DefaultBaseTableView
createMenuBar(Shell) - Method in class hdf.view.TableView.DefaultScalarDSTableView
  Creates the menubar for the Shell.
createNamedDatatype(Datatype, String) - Method in class hdf.object.FileFormat
  Creates a named datatype in a file.
createNamedDatatype(Datatype, String) - Method in class hdf.object.fits.FitsFile
createNamedDatatype(Datatype, String) - Method in class hdf.object.h4.H4File
createNamedDatatype(Datatype, String) - Method in class hdf.object.h5.H5File
  Creates a named datatype in a file.
createNamedDatatype(Datatype, String) - Method in class hdf.object.nc2.NC2File
createNative() - Method in class hdf.object.Datatype
  Converts the datatype object to a native datatype.
createNative() - Method in class hdf.object.fits.FitsDatatype
createNative() - Method in class hdf.object.h4.H4Datatype
createNative() - Method in class hdf.object.h5.H5Datatype
createNative() - Method in class hdf.object.nc2.NC2Datatype
createNaturePalette() - Static method in class hdf.view.Tools
  Creates the nature palette of the indexed 256-color table.
createNewDatatype() - Method in class hdf.view.dialog.NewDatatypeDialog
createNewDatatype(String) - Method in class hdf.view.dialog.NewDataObjectDialog
createNewFile(String, String, String, List<FileFormat>) - Static method in class hdf.view.Tools
  Create a new HDF file with default file creation properties
createPropertyFile(String, String) - Static method in class hdf.view.ViewProperties
createRainbowPalette() - Static method in class hdf.view.Tools
  Creates the rainbow palette of the indexed 256-color table.
createReverseGrayPalette() - Static method in class hdf.view.Tools
  Creates the reverse gray palette of the indexed 256-color table.
createScalarDS(String, Group, Datatype, long[], long[], long[], int, Object) - Method in class hdf.object.FileFormat
createScalarDS(String, Group, Datatype, long[], long[], long[], int, Object, Object) - Method in class hdf.object.FileFormat
  Creates a new dataset in a file with/without chunking/compression.
createScalarDS(String, Group, Datatype, long[], long[], long[], int, Object, Object) - Method in class hdf.object.fits.FitsFile
createScalarDS(String, Group, Datatype, long[], long[], long[], int, Object, Object) - Method in class hdf.object.h4.H4File
createScalarDS(String, Group, Datatype, long[], long[], long[], int, Object, Object) - Method in class hdf.object.h5.H5File
createScalarDS(String, Group, Datatype, long[], long[], long[], int, Object, Object) - Method in class hdf.object.nc2.NC2File
createTable(Composite, DataFormat) - Method in class hdf.view.TableView.DefaultBaseTableView
createTable(Composite, DataFormat) - Method in class hdf.view.TableView.DefaultCompoundDSTableView
  Creates a NatTable for a Compound dataset
createTable(Composite, DataFormat) - Method in class hdf.view.TableView.DefaultScalarDSTableView
  Creates a NatTable for a Scalar dataset.
createTrueColorImage(byte[], boolean, long, long) - Static method in class hdf.view.Tools
  Creates a true color image.
createUI() - Method in class hdf.view.PaletteView.DefaultPaletteView
createWavePalette() - Static method in class hdf.view.Tools
  Creates the wave palette of the indexed 256-color table.
CRT_ORDER_INDEXED - Static variable in class hdf.object.Group
CRT_ORDER_TRACKED - Static variable in class hdf.object.Group
curFont - Variable in class hdf.view.dialog.NewDataObjectDialog
curFont - Variable in class hdf.view.dialog.UserOptionsDefaultPage
curFont - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView
curFont - Variable in class hdf.view.TableView.DefaultBaseTableView
customFormat - Variable in class hdf.view.TableView.DefaultBaseTableView

## D

data - Variable in class hdf.object.Dataset
  The memory buffer that holds the raw data array of the dataset.
data - Variable in class hdf.view.Chart
  the data values of line points or histogram
dataBuf - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
dataDisplayConverter - Variable in class hdf.view.TableView.DefaultBaseTableView
DataDisplayConverterFactory - Class in hdf.view.TableView
  A Factory class to return a concrete class implementing the IDisplayConverter interface in order to convert data values into human-readable forms in a NatTable.
DataDisplayConverterFactory() - Constructor for class hdf.view.TableView.DataDisplayConverterFactory
DataDisplayConverterFactory.HDFDisplayConverter - Class in hdf.view.TableView
DataFactoryUtils - Class in hdf.view.TableView
  A class containing utility functions for the various DataXXXFactory classes, such as DataProviderFactory, DataDisplayConverterFactory and DataValidatorFactory.
DataFactoryUtils() - Constructor for class hdf.view.TableView.DataFactoryUtils
DataFormat - Interface in hdf.object
  An interface that provides general I/O operations for object data.
dataLayer - Variable in class hdf.view.TableView.DefaultBaseTableView
dataObject - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView
  The HDF data object
dataObject - Variable in class hdf.view.TableView.DefaultBaseTableView
DataOptionDialog - Class in hdf.view.dialog
  DataOptionDialog is an dialog window used to select display options.
DataOptionDialog(Shell, DataFormat) - Constructor for class hdf.view.dialog.DataOptionDialog
  Constructs a DataOptionDialog with the given HDFView.
dataProvider - Variable in class hdf.view.TableView.DefaultBaseTableView
DataProviderFactory - Class in hdf.view.TableView
  A Factory class to return a concrete class implementing the IDataProvider interface in order to provide data for a NatTable.
DataProviderFactory() - Constructor for class hdf.view.TableView.DataProviderFactory
DataProviderFactory.HDFDataProvider - Class in hdf.view.TableView
Dataset - Class in hdf.object
  The abstract class provides general APIs to create and manipulate dataset objects, and retrieve dataset properties, datatype and dimension sizes.
Dataset(FileFormat, String, String) - Constructor for class hdf.object.Dataset
  Constructs a Dataset object with a given file, name and path.
Dataset(FileFormat, String, String, long[]) - Constructor for class hdf.object.Dataset
  Deprecated.
  Not for public use in the future.
  Using `Dataset(FileFormat, String, String)`
dataTable - Variable in class hdf.view.TableView.DefaultBaseTableView
datatype - Variable in class hdf.object.Dataset
  The datatype object of the dataset.
Datatype - Class in hdf.object
  Datatype is an abstract class that defines datatype characteristics and APIs for a data type.
Datatype(int, int, int, int) - Constructor for class hdf.object.Datatype
  Constructs a Datatype with specified class, size, byte order and sign.
Datatype(int, int, int, int, Datatype) - Constructor for class hdf.object.Datatype
  Constructs a Datatype with specified class, size, byte order and sign.
Datatype(int, int, int, int, Datatype, Datatype) - Constructor for class hdf.object.Datatype
  Constructs a Datatype with specified class, size, byte order and sign.
Datatype(FileFormat, int, int, int, int, Datatype, Datatype) - Constructor for class hdf.object.Datatype
  Constructs a Datatype with specified class, size, byte order and sign.
Datatype(FileFormat, long) - Constructor for class hdf.object.Datatype
  Constructs a Datatype with a given native datatype identifier.
Datatype(FileFormat, long, Datatype) - Constructor for class hdf.object.Datatype
  Constructs a Datatype with a given native datatype identifier.
Datatype(FileFormat, String, String) - Constructor for class hdf.object.Datatype
  Constructs a named datatype with a given file, name and path.
Datatype(FileFormat, String, String, long[]) - Constructor for class hdf.object.Datatype
  Deprecated.
  Not for public use in the future.
  Using `Datatype(FileFormat, String, String)`
datatypeClass - Variable in class hdf.object.Datatype
  The class of the datatype.
datatypeDescription - Variable in class hdf.object.Datatype
datatypeOrder - Variable in class hdf.object.Datatype
  The byte order of the datatype.
datatypeSign - Variable in class hdf.object.Datatype
  The sign of the datatype.
datatypeSize - Variable in class hdf.object.Datatype
  The size (in bytes) of the datatype.
DataValidatorFactory - Class in hdf.view.TableView
  A Factory class to return a DataValidator class for a NatTable instance based upon the Datatype that it is supplied.
DataValidatorFactory() - Constructor for class hdf.view.TableView.DataValidatorFactory
DataValidatorFactory.HDFDataValidator - Class in hdf.view.TableView
dataValue - Variable in class hdf.view.TableView.DefaultBaseTableView
DataView - Interface in hdf.view.DataView
  The data view interface for displaying data objects
DATAVIEW_IMAGE - Static variable in interface hdf.view.DataView.DataView
  The image view type
DATAVIEW_TABLE - Static variable in interface hdf.view.DataView.DataView
  The table view type
DATAVIEW_UNKNOWN - Static variable in interface hdf.view.DataView.DataView
  The unknown view type
DataViewFactory - Class in hdf.view.DataView
DataViewFactory() - Constructor for class hdf.view.DataView.DataViewFactory
DataViewFactoryProducer - Class in hdf.view.DataView
  Following the Abstract Factory Pattern, represents a class to produce different types of DataView factory classes depending on the given DataViewType enum value.
DataViewFactoryProducer() - Constructor for class hdf.view.DataView.DataViewFactoryProducer
DataViewManager - Interface in hdf.view.DataView
  Defines a list of APIs for the main HDFView windows
debug(Object) - Method in class hdf.object.HObject
  Print out debug information
DEFAULT_COMPOUND_DATASET_TABLEVIEW_NAME - Static variable in class hdf.view.ViewProperties
DEFAULT_DATASET_METADATAVIEW_NAME - Static variable in class hdf.view.ViewProperties
DEFAULT_DATATYPE_METADATAVIEW_NAME - Static variable in class hdf.view.ViewProperties
DEFAULT_GROUP_METADATAVIEW_NAME - Static variable in class hdf.view.ViewProperties
  Default MetaDataView class names
DEFAULT_IMAGEVIEW_NAME - Static variable in class hdf.view.ViewProperties
  Default ImageView class names
DEFAULT_LINK_METADATAVIEW_NAME - Static variable in class hdf.view.ViewProperties
DEFAULT_MODULE_TEXT - Static variable in class hdf.view.ViewProperties
  Text for default selection of modules
DEFAULT_PALETTEVIEW_NAME - Static variable in class hdf.view.ViewProperties
  Default PaletteView class names
DEFAULT_SCALAR_ATTRIBUTE_TABLEVIEW_NAME - Static variable in class hdf.view.ViewProperties
DEFAULT_SCALAR_DATASET_TABLEVIEW_NAME - Static variable in class hdf.view.ViewProperties
  Default TableView class names
DEFAULT_STRING_ATTRIBUTE_LENGTH - Static variable in class hdf.view.dialog.NewAttributeDialog
  the default length of a string attribute
DEFAULT_TREEVIEW_NAME - Static variable in class hdf.view.ViewProperties
  Default TreeView class names
DefaultBaseMetaDataView - Class in hdf.view.MetaDataView
  DefaultBaseMetaDataView is a default implementation of the MetaDataView which is used to show data properties of an object.
DefaultBaseMetaDataView(Composite, DataViewManager, HObject) - Constructor for class hdf.view.MetaDataView.DefaultBaseMetaDataView
DefaultBaseTableView - Class in hdf.view.TableView
  DefaultBaseTableView serves as the base class for a DataView that displays HDF data in a tabular format.
DefaultBaseTableView(DataViewManager) - Constructor for class hdf.view.TableView.DefaultBaseTableView
  Constructs a base TableView with no additional data properties.
DefaultBaseTableView(DataViewManager, HashMap) - Constructor for class hdf.view.TableView.DefaultBaseTableView
  Constructs a base TableView with the specified data properties.
DefaultBaseTableView.ColumnHeader - Class in hdf.view.TableView
  An implementation of the table's Column Header which adapts to the current font.
DefaultBaseTableView.EditingGridLayer - Class in hdf.view.TableView
  An implementation of a GridLayer with support for column grouping and with editing triggered by a double click instead of a single click.
DefaultBaseTableView.RefContextMenu - Class in hdf.view.TableView
DefaultBaseTableView.RowHeader - Class in hdf.view.TableView
  An implementation of the table's Row Header which adapts to the current font.
DefaultBaseTableView.RowHeaderDataProvider - Class in hdf.view.TableView
  Custom Row Header data provider to set row indices based on Index Base for both Scalar Datasets and Compound Datasets.
DefaultBaseTableView.ViewType - Enum Class in hdf.view.TableView
DefaultCompoundDSTableView - Class in hdf.view.TableView
DefaultCompoundDSTableView(DataViewManager) - Constructor for class hdf.view.TableView.DefaultCompoundDSTableView
  Constructs a CompoundDS TableView with no additional data properties.
DefaultCompoundDSTableView(DataViewManager, HashMap) - Constructor for class hdf.view.TableView.DefaultCompoundDSTableView
  Constructs a CompoundDS TableView with the specified data properties.
DefaultDatasetMetaDataView - Class in hdf.view.MetaDataView
DefaultDatasetMetaDataView(Composite, DataViewManager, HObject) - Constructor for class hdf.view.MetaDataView.DefaultDatasetMetaDataView
DefaultDatatypeMetaDataView - Class in hdf.view.MetaDataView
DefaultDatatypeMetaDataView(Composite, DataViewManager, HObject) - Constructor for class hdf.view.MetaDataView.DefaultDatatypeMetaDataView
DefaultFileFilter - Class in hdf.view
  A convenience implementation of FileFilter that filters out all files except for those type extensions that it knows about.
DefaultFileFilter() - Constructor for class hdf.view.DefaultFileFilter
  Creates a file filter.
DefaultFileFilter(String) - Constructor for class hdf.view.DefaultFileFilter
  Creates a file filter that accepts files with the given extension.
DefaultFileFilter(String[]) - Constructor for class hdf.view.DefaultFileFilter
  Creates a file filter from the given string array.
DefaultFileFilter(String[], String) - Constructor for class hdf.view.DefaultFileFilter
  Creates a file filter from the given string array and description.
DefaultFileFilter(String, String) - Constructor for class hdf.view.DefaultFileFilter
  Creates a file filter that accepts the given file type.
DefaultGroupMetaDataView - Class in hdf.view.MetaDataView
DefaultGroupMetaDataView(Composite, DataViewManager, HObject) - Constructor for class hdf.view.MetaDataView.DefaultGroupMetaDataView
DefaultImageView - Class in hdf.view.ImageView
  ImageView displays an HDF dataset as an image.
DefaultImageView(DataViewManager) - Constructor for class hdf.view.ImageView.DefaultImageView
  Constructs an ImageView.
DefaultImageView(DataViewManager, HashMap) - Constructor for class hdf.view.ImageView.DefaultImageView
  Constructs an ImageView.
DefaultImageView.FlipFilter - Class in hdf.view.ImageView
  FlipFilter creates image filter to flip image horizontally or vertically.
DefaultImageView.Rotate90Filter - Class in hdf.view.ImageView
DefaultImageViewFactory - Class in hdf.view.ImageView
  A simple Factory class which returns concrete instances of the default ImageView.
DefaultImageViewFactory() - Constructor for class hdf.view.ImageView.DefaultImageViewFactory
DefaultLinkMetaDataView - Class in hdf.view.MetaDataView
DefaultLinkMetaDataView(Composite, DataViewManager, HObject) - Constructor for class hdf.view.MetaDataView.DefaultLinkMetaDataView
DefaultMetaDataViewFactory - Class in hdf.view.MetaDataView
  A simple Factory class which returns concrete instances of the default MetaDataView, based on whether the data object is a Group, Dataset, Datatype or other form of object.
DefaultMetaDataViewFactory() - Constructor for class hdf.view.MetaDataView.DefaultMetaDataViewFactory
DefaultPaletteView - Class in hdf.view.PaletteView
  Displays a dialog for viewing and change palettes.
DefaultPaletteView(Shell, DataViewManager, ImageView) - Constructor for class hdf.view.PaletteView.DefaultPaletteView
DefaultPaletteView(Shell, ImageView) - Constructor for class hdf.view.PaletteView.DefaultPaletteView
DefaultPaletteViewFactory - Class in hdf.view.PaletteView
  A simple Factory class which returns concrete instances of the default PaletteView.
DefaultPaletteViewFactory() - Constructor for class hdf.view.PaletteView.DefaultPaletteViewFactory
DefaultScalarAttributeTableView - Class in hdf.view.TableView
DefaultScalarAttributeTableView(DataViewManager) - Constructor for class hdf.view.TableView.DefaultScalarAttributeTableView
DefaultScalarAttributeTableView(DataViewManager, HashMap) - Constructor for class hdf.view.TableView.DefaultScalarAttributeTableView
DefaultScalarDSTableView - Class in hdf.view.TableView
DefaultScalarDSTableView(DataViewManager) - Constructor for class hdf.view.TableView.DefaultScalarDSTableView
  Constructs a ScalarDS TableView with no additional data properties.
DefaultScalarDSTableView(DataViewManager, HashMap) - Constructor for class hdf.view.TableView.DefaultScalarDSTableView
  Constructs a ScalarDS TableView with the specified data properties.
DefaultTableViewFactory - Class in hdf.view.TableView
  A simple Factory class which returns concrete instances of the default TableView, based on whether the data object to be viewed is a scalar or compound dataset or is an attribute.
DefaultTableViewFactory() - Constructor for class hdf.view.TableView.DefaultTableViewFactory
DefaultTreeView - Class in hdf.view.TreeView
  TreeView defines APIs for opening files and displaying the file structure in a tree structure.
DefaultTreeView(Composite, DataViewManager) - Constructor for class hdf.view.TreeView.DefaultTreeView
DefaultTreeViewFactory - Class in hdf.view.TreeView
  A simple Factory class which returns concrete instances of the default TreeView.
DefaultTreeViewFactory() - Constructor for class hdf.view.TreeView.DefaultTreeViewFactory
delete(HObject) - Method in class hdf.object.FileFormat
  Deletes an object from a file.
delete(HObject) - Method in class hdf.object.fits.FitsFile
delete(HObject) - Method in class hdf.object.h4.H4File
  Delete an object from the file.
delete(HObject) - Method in class hdf.object.h5.H5File
delete(HObject) - Method in class hdf.object.nc2.NC2File
deleteAttribute(HObject) - Method in class hdf.view.MetaDataView.DefaultBaseMetaDataView
deleteAttribute(HObject) - Method in interface hdf.view.MetaDataView.MetaDataView
  Delete an attribute from a data object.
DELIMITER_COLON - Static variable in class hdf.view.ViewProperties
  name of the tab delimiter
DELIMITER_COMMA - Static variable in class hdf.view.ViewProperties
  name of the tab delimiter
DELIMITER_SEMI_COLON - Static variable in class hdf.view.ViewProperties
  name of the tab delimiter
DELIMITER_SPACE - Static variable in class hdf.view.ViewProperties
  name of the tab delimiter
DELIMITER_TAB - Static variable in class hdf.view.ViewProperties
  name of the tab delimiter
depthFirstMemberList() - Method in class hdf.object.Group
DFTAG_NDG_NETCDF - Static variable in class hdf.object.h4.H4SDS
  tag for netCDF datasets.
DFTAG_NDG_NETCDF - Static variable in class hdf.object.nc2.NC2Dataset
  tag for netCDF datasets.
dimNames - Variable in class hdf.object.Dataset
  Array of strings that represent the dimension names.
dims - Variable in class hdf.object.Dataset
  The current dimension sizes of the dataset
display - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView
displayToCanonicalValue(Object) - Method in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

## E

EditingGridLayer(ILayer, ILayer, ILayer, ILayer) - Constructor for class hdf.view.TableView.DefaultBaseTableView.EditingGridLayer
endianChoice - Variable in class hdf.view.dialog.NewDataObjectDialog
enumMembers - Variable in class hdf.object.Datatype
  The (name, value) pairs of enum members.
equals(HObject) - Method in class hdf.object.HObject
  Returns whether this HObject is equal to the specified HObject by comparing their OIDs.
equals(Object) - Method in class hdf.object.Attribute
  Returns whether this Attribute is equal to the specified HObject by comparing various properties.
equals(Object) - Method in class hdf.object.HObject
equalsOID(long[]) - Method in class hdf.object.HObject
  Checks if the OID of the object is the same as the given object identifier within the same file.
errStr - Static variable in class hdf.view.TableView.DataFactoryUtils
exportDataset(String, Dataset, int) - Method in class hdf.object.FileFormat
  Export dataset.
exportDataset(String, Dataset, int) - Method in class hdf.object.h5.H5File
  Export dataset.
extend(long[]) - Method in class hdf.object.h5.H5ScalarDS
  H5Dset_extent verifies that the dataset is at least of size size, extending it if necessary.
EXTRACT - Enum constant in enum class hdf.view.ViewProperties.BITMASK_OP
extractCompoundInfo(H5Datatype, String, List<String>, List<Datatype>) - Static method in class hdf.object.h5.H5Datatype
  Extracts compound information into flat structure.

## F

fid - Variable in class hdf.object.FileFormat
  File identifier.
FILE_CREATE_DELETE - Static variable in class hdf.object.FileFormat
  Flag for creating/truncating a file.
FILE_CREATE_EARLY_LIB - Static variable in class hdf.object.FileFormat
  Flag to indicate if the earliest version of library is used when creating a new file.
FILE_CREATE_OPEN - Static variable in class hdf.object.FileFormat
  Flag for creating/opening a file.
FILE_OBJ_SEP - Static variable in class hdf.object.FileFormat
  A separator that separates file name and object name.
FILE_TYPE_BMP - Static variable in class hdf.view.Tools
  Key for BMP image file type.
FILE_TYPE_GIF - Static variable in class hdf.view.Tools
  Key for GIF image file type.
FILE_TYPE_HDF4 - Static variable in class hdf.object.FileFormat
  Key for HDF4 file format.
FILE_TYPE_HDF5 - Static variable in class hdf.object.FileFormat
  Key for HDF5 file format.
FILE_TYPE_IMAGE - Static variable in class hdf.view.Tools
  Key for all image file type.
FILE_TYPE_JPEG - Static variable in class hdf.view.Tools
  Key for JPEG image file type.
FILE_TYPE_NC3 - Static variable in class hdf.object.FileFormat
  Key for NetCDF file format.
FILE_TYPE_PNG - Static variable in class hdf.view.Tools
  Key for PNG image file type.
FILE_TYPE_TIFF - Static variable in class hdf.view.Tools
  Key for TIFF image file type.
fileFormat - Variable in class hdf.object.HObject
  The file which contains the object
fileFormat - Variable in class hdf.view.dialog.NewDataObjectDialog
FileFormat - Class in hdf.object
  FileFormat defines general interfaces for working with files whose data is organized according to a supported format.
FileFormat(String) - Constructor for class hdf.object.FileFormat
  Creates a new FileFormat instance with the given filename.
fillValue - Variable in class hdf.object.ScalarDS
  The fill value of the dataset.
fillValue - Variable in class hdf.view.TableView.DefaultBaseTableView
filterNonSelectedMembers(CompoundDataFormat, Datatype) - Static method in class hdf.view.TableView.DataFactoryUtils
filters - Variable in class hdf.object.Dataset
  The filters information.
findDataDist(Object, int[], double[]) - Static method in class hdf.view.Tools
  Finds the distribution of data values
findMinMax(Object, double[], Object) - Static method in class hdf.view.Tools
  Finds the min and max values of the data array
findObject(FileFormat, long[]) - Static method in class hdf.object.FileFormat
  Finds an object by its object ID
findObject(FileFormat, String) - Static method in class hdf.object.FileFormat
  Finds an object by the full path of the object (path+name)
findTreeItem(HObject) - Method in class hdf.view.TreeView.DefaultTreeView
  Returns the tree item that contains the given data object.
findTreeItem(HObject) - Method in interface hdf.view.TreeView.TreeView
FitsDataset - Class in hdf.object.fits
  FitsDataset describes an multi-dimension array of HDF5 scalar or atomic data types, such as byte, int, short, long, float, double and string, and operations performed on the scalar dataset
FitsDataset(FileFormat, BasicHDU, String, long[]) - Constructor for class hdf.object.fits.FitsDataset
  Constructs an FitsDataset object with specific netcdf variable.
FitsDatatype - Class in hdf.object.fits
  Datatype encapsulates information of a datatype.
FitsDatatype(int, int, int, int) - Constructor for class hdf.object.fits.FitsDatatype
  Create an Datatype with specified class, size, byte order and sign.
FitsDatatype(long) - Constructor for class hdf.object.fits.FitsDatatype
  Create a Datatype with a given fits native datatype.
FitsFile - Class in hdf.object.fits
  This class provides file level APIs.
FitsFile() - Constructor for class hdf.object.fits.FitsFile
  Constructs an empty FitsFile with read-only access.
FitsFile(String) - Constructor for class hdf.object.fits.FitsFile
  Constructs an FitsFile object of given file name with read-only access.
FitsGroup - Class in hdf.object.fits
  An H5Group represents HDF5 group, inheriting from Group.
FitsGroup(FileFormat, String, String, Group, long[]) - Constructor for class hdf.object.fits.FitsGroup
  Constructs an HDF5 group with specific name, path, and parent.
fixedDataLength - Variable in class hdf.view.TableView.DefaultBaseTableView
flatNameList - Variable in class hdf.object.Attribute
  A list of names of all compound fields including nested fields.
flatTypeList - Variable in class hdf.object.Attribute
  A list of datatypes of all compound fields including nested fields.
FLIP_HORIZONTAL - Static variable in class hdf.view.ImageView.DefaultImageView
  Horizontal direction to flip an image.
FLIP_VERTICAL - Static variable in class hdf.view.ImageView.DefaultImageView
  Vertical direction to flip an image.
FlipFilter(int) - Constructor for class hdf.view.ImageView.DefaultImageView.FlipFilter
  Constructs an image filter to flip horizontally or vertically.
fromNative() - Method in class hdf.object.fits.FitsDatatype
  Translate fits datatype identifier into FitsDatatype.
fromNative(long) - Method in class hdf.object.Datatype
  Set datatype characteristics (class, size, byte order and sign) from a given datatype identifier.
fromNative(long) - Method in class hdf.object.fits.FitsDatatype
  Translate fits datatype identifier into FitsDatatype.
fromNative(long) - Method in class hdf.object.h4.H4Datatype
fromNative(long) - Method in class hdf.object.h5.H5Datatype
fromNative(long) - Method in class hdf.object.nc2.NC2Datatype
  Translate NetCDF3 datatype object into NC2Datatype.
fullFileName - Variable in class hdf.object.FileFormat
  The absolute pathname (path+name) of the file.

## G

generalObjectInfoPane - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView
get(String) - Method in class hdf.object.FileFormat
  Gets the HObject with the specified path from the file.
get(String) - Method in class hdf.object.fits.FitsFile
get(String) - Method in class hdf.object.h4.H4File
  Get an individual HObject with a given path.
get(String) - Method in class hdf.object.h5.H5File
get(String) - Method in class hdf.object.nc2.NC2File
getActionCommand() - Method in interface hdf.view.HelpView.HelpView
getAnimationIcon() - Static method in class hdf.view.ViewProperties
getAppsIcon() - Static method in class hdf.view.ViewProperties
getArrayDims() - Method in class hdf.object.Datatype
  Returns the dimensions of an Array Datatype.
getAttribute() - Method in class hdf.view.dialog.NewAttributeDialog
getAttribute(HObject) - Static method in class hdf.object.h5.H5File
  Returns a list of attributes for the specified object.
getAttribute(HObject, int, int) - Static method in class hdf.object.h5.H5File
  Returns a list of attributes for the specified object, in creation or alphabetical order.
getAudioIcon() - Static method in class hdf.view.ViewProperties
getAutocontrastIcon() - Static method in class hdf.view.ViewProperties
getBinaryDataFromFile(Object, String, ByteOrder) - Static method in class hdf.view.Tools
  Reads data from a binary file into a buffer.
getBitmask() - Method in class hdf.view.dialog.DataOptionDialog
getBlankIcon() - Static method in class hdf.view.ViewProperties
getBrightIcon() - Static method in class hdf.view.ViewProperties
getBytes(Object, double[], long, long, boolean, byte[]) - Static method in class hdf.view.Tools
  Convert an array of raw data into array of a byte data.
getBytes(Object, double[], long, long, boolean, List<Number>, boolean, byte[]) - Static method in class hdf.view.Tools
getBytes(Object, double[], long, long, boolean, List<Number>, boolean, byte[], List<Integer>) - Static method in class hdf.view.Tools
  Convert an array of raw data into array of a byte data.
getBytes(Object, double[], long, long, boolean, List<Number>, byte[]) - Static method in class hdf.view.Tools
getChartIcon() - Static method in class hdf.view.ViewProperties
getChunkSize() - Method in class hdf.object.Dataset
  Returns the array that contains the dimension sizes of the chunk of the dataset.
getColumnCount() - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
getColumnCount() - Method in class hdf.view.TableView.DefaultBaseTableView.RowHeaderDataProvider
getComponentCount() - Method in class hdf.object.h4.H4GRImage
  Returns the number of components of this image data.
getCompoundMemberNames() - Method in class hdf.object.Datatype
getCompoundMemberTypes() - Method in class hdf.object.Datatype
getCompression() - Method in interface hdf.object.DataFormat
  Returns the string representation of compression information.
getCompression() - Method in class hdf.object.Dataset
  Returns the string representation of compression information.
getConvertByteToString() - Method in class hdf.object.Dataset
  Returns the flag that indicates if a byte array is converted to a string array.
getConvertedFile() - Method in class hdf.view.dialog.ImageConversionDialog
getCopyIcon() - Static method in class hdf.view.ViewProperties
getCurrentFiles() - Method in class hdf.view.TreeView.DefaultTreeView
getCurrentFiles() - Method in interface hdf.view.TreeView.TreeView
getCurrentObject() - Method in class hdf.view.TreeView.DefaultTreeView
getCurrentObject() - Method in interface hdf.view.TreeView.TreeView
getCutIcon() - Static method in class hdf.view.ViewProperties
getData() - Method in interface hdf.object.DataFormat
  Retrieves the object's data from the file.
getData() - Method in class hdf.object.Dataset
  Returns the data buffer of the dataset in memory.
getDataDelimiter() - Static method in class hdf.view.ViewProperties
getDataDisplayConverter(DataFormat) - Static method in class hdf.view.TableView.DataDisplayConverterFactory
getDataEditingRule(DataFormat) - Method in class hdf.view.TableView.DefaultBaseTableView
getDataEditingRule(DataFormat) - Method in class hdf.view.TableView.DefaultCompoundDSTableView
  Returns an IEditableRule that determines whether cells can be edited.
getDataEditingRule(DataFormat) - Method in class hdf.view.TableView.DefaultScalarDSTableView
  Returns an IEditableRule that determines whether cells can be edited.
getDataLayer() - Method in class hdf.view.TableView.DefaultBaseTableView
getDataObject() - Method in interface hdf.view.DataView.DataView
getDataObject() - Method in class hdf.view.ImageView.DefaultImageView
getDataObject() - Method in class hdf.view.MetaDataView.DefaultBaseMetaDataView
getDataObject() - Method in class hdf.view.PaletteView.DefaultPaletteView
getDataObject() - Method in class hdf.view.TableView.DefaultBaseTableView
getDataProvider(DataFormat, Object, boolean) - Static method in class hdf.view.TableView.DataProviderFactory
getDatasetIcon() - Static method in class hdf.view.ViewProperties
getDatasetIconA() - Static method in class hdf.view.ViewProperties
getDatatype() - Method in class hdf.object.Attribute
getDatatype() - Method in interface hdf.object.DataFormat
  Returns the datatype of the data object.
getDatatype() - Method in class hdf.object.Dataset
getDatatype() - Method in class hdf.object.fits.FitsDataset
getDatatype() - Method in class hdf.object.h4.H4GRImage
getDatatype() - Method in class hdf.object.h4.H4SDS
getDatatype() - Method in class hdf.object.h4.H4Vdata
getDatatype() - Method in class hdf.object.h5.H5CompoundDS
getDatatype() - Method in class hdf.object.h5.H5ScalarDS
getDatatype() - Method in class hdf.object.nc2.NC2Dataset
getDatatypeBase() - Method in class hdf.object.Datatype
  Returns the base datatype for this datatype.
getDatatypeClass() - Method in class hdf.object.Datatype
  Returns the class of the datatype.
getDatatypeIcon() - Static method in class hdf.view.ViewProperties
getDatatypeIconA() - Static method in class hdf.view.ViewProperties
getDatatypeOrder() - Method in class hdf.object.Datatype
  Returns the byte order of the datatype.
getDatatypeSign() - Method in class hdf.object.Datatype
  Returns the sign (SIGN_NONE, SIGN_2) of an integer datatype.
getDatatypeSize() - Method in class hdf.object.Datatype
  Returns the size of the datatype in bytes.
getDatatypeSize(long) - Static method in class hdf.object.h5.H5Datatype
  Returns the size (in bytes) of a given datatype identifier.
getDataValidator(DataFormat) - Static method in class hdf.view.TableView.DataValidatorFactory
getDataValue(int, int) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
getDataValue(int, int) - Method in class hdf.view.TableView.DefaultBaseTableView.RowHeaderDataProvider
getDataValue(Object, int) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
getDataValue(Object, int, int) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
getDataView(HObject) - Method in interface hdf.view.DataView.DataViewManager
  Returns DataView that contains the specified data object.
getDataView(HObject) - Method in class hdf.view.HDFView
getDataViewName() - Method in class hdf.view.dialog.DataOptionDialog
getDescription() - Method in class hdf.object.Datatype
  Returns a short text description of this datatype.
getDescription() - Method in class hdf.object.fits.FitsDatatype
getDescription() - Method in class hdf.object.h4.H4Datatype
getDescription() - Method in class hdf.object.h5.H5Datatype
getDescription() - Method in class hdf.object.nc2.NC2Datatype
getDescription() - Method in class hdf.view.DefaultFileFilter
getDimNames() - Method in class hdf.object.Dataset
  Returns the array of strings that represent the dimension names.
getDims() - Method in interface hdf.object.DataFormat
  Returns the array that contains the dimension sizes of the data value of the data object.
getDims() - Method in class hdf.object.Dataset
  Returns the array that contains the dimension sizes of the dataset.
getEarlyLib() - Static method in class hdf.view.ViewProperties
  Returns value of default lib version for the earliest.
getEnumMembers() - Method in class hdf.object.Datatype
  Returns the Map<String,String> pairs of enum members for enum datatype.
getEnumMembersAsString() - Method in class hdf.object.Datatype
  Returns the HashMap pairs of enum members for enum datatype.
getExtensions() - Method in class hdf.view.DefaultFileFilter
getFactory(ViewProperties.DataViewType) - Static method in class hdf.view.DataView.DataViewFactoryProducer
getFID() - Method in class hdf.object.FileFormat
  Returns file identifier of open file associated with this instance.
getFID() - Method in class hdf.object.HObject
  Returns the file identifier of of the file containing the object.
getFieldCount() - Method in class hdf.object.h4.H4Vdata
  Returns the number of fields.
getFieldOrders() - Method in class hdf.object.h4.H4Vdata
  Returns the orders of fields
getFile() - Method in class hdf.object.HObject
  Returns the name of the file that contains this data object.
getFilecloseIcon() - Static method in class hdf.view.ViewProperties
getFileExtension() - Static method in class hdf.view.ViewProperties
getFileExtensions() - Static method in class hdf.object.FileFormat
  Returns a list of file extensions for all supported file formats.
getFileFilter() - Static method in class hdf.view.DefaultFileFilter
getFileFilterBinary() - Static method in class hdf.view.DefaultFileFilter
getFileFilterBMP() - Static method in class hdf.view.DefaultFileFilter
getFileFilterGIF() - Static method in class hdf.view.DefaultFileFilter
getFileFilterHDF4() - Static method in class hdf.view.DefaultFileFilter
getFileFilterHDF5() - Static method in class hdf.view.DefaultFileFilter
getFileFilterJPEG() - Static method in class hdf.view.DefaultFileFilter
getFileFilterNetCDF3() - Static method in class hdf.view.DefaultFileFilter
getFileFilterPNG() - Static method in class hdf.view.DefaultFileFilter
getFileFilterText() - Static method in class hdf.view.DefaultFileFilter
getFileFilterTIFF() - Static method in class hdf.view.DefaultFileFilter
getFileFormat() - Method in class hdf.object.HObject
  Returns the file that contains the object.
getFileFormat(String) - Static method in class hdf.object.FileFormat
  Returns the FileFormat with specified key from the list of supported formats.
getFileFormatKeys() - Static method in class hdf.object.FileFormat
  Returns an Enumeration of keys for all supported formats.
getFileFormats() - Static method in class hdf.object.FileFormat
  Returns an array of supported FileFormat instances.
getFilenewIcon() - Static method in class hdf.view.ViewProperties
getFileopenIcon() - Static method in class hdf.view.ViewProperties
getFilePath() - Method in class hdf.object.FileFormat
  Returns the absolute path for the file.
getFilesaveIcon() - Static method in class hdf.view.ViewProperties
getFillValue() - Method in class hdf.object.Attribute
getFillValue() - Method in interface hdf.object.DataFormat
  Returns the fill values for the data object.
getFillValue() - Method in class hdf.object.h4.H4Vdata
getFillValue() - Method in class hdf.object.h5.H5CompoundDS
getFillValue() - Method in class hdf.object.ScalarDS
  Returns the fill values for the dataset.
getFilteredImageValues() - Method in class hdf.object.ScalarDS
  Get a list of values that will be filtered out in an image.
getFilters() - Method in class hdf.object.Dataset
  Returns the string representation of filter information.
getFirstIcon() - Static method in class hdf.view.ViewProperties
getFitsFile() - Method in class hdf.object.fits.FitsFile
getFoldercloseIcon() - Static method in class hdf.view.ViewProperties
getFoldercloseIconA() - Static method in class hdf.view.ViewProperties
getFolderopenIcon() - Static method in class hdf.view.ViewProperties
getFolderopenIconA() - Static method in class hdf.view.ViewProperties
getFontSize() - Static method in class hdf.view.ViewProperties
getFontType() - Static method in class hdf.view.ViewProperties
getFullName() - Method in class hdf.object.HObject
  Returns the full name (group path + object name) of the object.
getGRAccessID() - Method in class hdf.object.h4.H4File
  Returns the GR identifier, which is returned from GRstart(fid).
getH4Icon() - Static method in class hdf.view.ViewProperties
getH4IconR() - Static method in class hdf.view.ViewProperties
getH4toH5() - Static method in class hdf.view.ViewProperties
getH5Icon() - Static method in class hdf.view.ViewProperties
getH5IconR() - Static method in class hdf.view.ViewProperties
getHDF5UserBlock(String) - Static method in class hdf.view.Tools
  Read HDF5 user block data into byte array.
getHdfIcon() - Static method in class hdf.view.ViewProperties
getHeight() - Method in interface hdf.object.DataFormat
  Returns the dimension size of the vertical axis.
getHeight() - Method in class hdf.object.Dataset
  Returns the dimension size of the vertical axis.
getHelpIcon() - Static method in class hdf.view.ViewProperties
getHelpViewList() - Static method in class hdf.view.ViewProperties
getHObject(String) - Static method in class hdf.object.FileFormat
  Deprecated.
  As of 2.4, replaced by `FileFormat.get(String)`

  This static method, which as been deprecated, causes two problems:

  - It can be very expensive if it is called many times or in a loop because each call to the method creates an instance of a file.
  - Since the method does not return the instance of the file, the file cannot be closed directly and may be left open (memory leak). The only way to close the file is through the object returned by this method.
getHObject(String, String) - Static method in class hdf.object.FileFormat
  Deprecated.
  As of 2.4, replaced by `FileFormat.get(String)`

  This static method, which as been deprecated, causes two problems:

  - It can be very expensive if it is called many times or in a loop because each call to the method creates an instance of a file.
  - Since the method does not return the instance of the file, the file cannot be closed directly and may be left open (memory leak). The only way to close the file is through the object returned by this method, for example:

         Dataset dset = H5File.getObject("hdf5_test.h5", "/images/iceburg");
         ...
         // close the file through dset
         dset.getFileFormat().close();

getImage() - Method in class hdf.view.ImageView.DefaultImageView
getImage() - Method in interface hdf.view.ImageView.ImageView
getImageByteData() - Method in class hdf.view.ImageView.DefaultImageView
getImageByteData() - Method in interface hdf.view.ImageView.ImageView
getImageDataRange() - Method in class hdf.object.ScalarDS
  Returns the (min, max) pair of image data range.
getImageFileFilter() - Static method in class hdf.view.DefaultFileFilter
getImageIcon() - Static method in class hdf.view.ViewProperties
getImageIconA() - Static method in class hdf.view.ViewProperties
getImageOrigin() - Static method in class hdf.view.ViewProperties
getImageView(DataViewManager, HashMap) - Method in class hdf.view.DataView.DataViewFactory
getImageView(DataViewManager, HashMap) - Method in class hdf.view.ImageView.DefaultImageViewFactory
getImageView(DataViewManager, HashMap) - Method in class hdf.view.MetaDataView.MetaDataViewFactory
getImageView(DataViewManager, HashMap) - Method in class hdf.view.PaletteView.PaletteViewFactory
getImageView(DataViewManager, HashMap) - Method in class hdf.view.TableView.TableViewFactory
getImageView(DataViewManager, HashMap) - Method in class hdf.view.TreeView.TreeViewFactory
getImageViewList() - Static method in class hdf.view.ViewProperties
getIndexOrder() - Method in class hdf.object.h5.H5File
getIndexOrder() - Static method in class hdf.view.ViewProperties
getIndexOrder(String) - Method in class hdf.object.FileFormat
getIndexOrder(String) - Method in class hdf.object.h4.H4File
getIndexOrder(String) - Method in class hdf.object.h5.H5File
getIndexOrderValue(String) - Static method in class hdf.object.FileFormat
getIndexOrderValue(String) - Static method in class hdf.object.h5.H5File
getIndexType() - Method in class hdf.object.h5.H5File
getIndexType() - Static method in class hdf.view.ViewProperties
getIndexType(String) - Method in class hdf.object.FileFormat
getIndexType(String) - Method in class hdf.object.h4.H4File
getIndexType(String) - Method in class hdf.object.h5.H5File
getIndexTypeValue(String) - Static method in class hdf.object.FileFormat
getIndexTypeValue(String) - Static method in class hdf.object.h5.H5File
getInstance(String) - Static method in class hdf.object.FileFormat
  Creates a FileFormat instance for the specified file.
getInterlace() - Method in class hdf.object.ScalarDS
  Returns the interlace mode of a true color image (RGB).
getIsValueChanged() - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
getJavaObjectRuntimeClass(Object) - Static method in class hdf.object.Utils
  Retrieves the Java Runtime Class of the given Object.
getLabel() - Method in interface hdf.view.HelpView.HelpView
getLargeHdfIcon() - Static method in class hdf.view.ViewProperties
getLastIcon() - Static method in class hdf.view.ViewProperties
getLateLib() - Static method in class hdf.view.ViewProperties
  Returns value of default lib version for the latest.
getLibBounds() - Method in class hdf.object.FileFormat
  Gets the bounds of library versions
getLibBounds() - Method in class hdf.object.h5.H5File
  Gets the bounds of library versions.
getLibBoundsDescription() - Method in class hdf.object.FileFormat
getLibBoundsDescription() - Method in class hdf.object.h5.H5File
  Gets the bounds of library versions as text.
getLibversion() - Method in class hdf.object.FileFormat
  Returns the version of the library for the implementing FileFormat class.
getLibversion() - Method in class hdf.object.fits.FitsFile
  Returns the version of the library.
getLibversion() - Method in class hdf.object.h4.H4File
  Returns the version of the HDF4 library.
getLibversion() - Method in class hdf.object.h5.H5File
  Returns the version of the HDF5 library.
getLibversion() - Method in class hdf.object.nc2.NC2File
  Returns the version of the library.
getLinkIcon() - Static method in class hdf.view.ViewProperties
getLinkTargetName(HObject) - Static method in class hdf.object.h5.H5File
  Retrieves the name of the target object that is being linked to.
getLinkTargetObjName() - Method in class hdf.object.HObject
  Returns the name of the target object that is linked to.
getListOfImageViews() - Static method in class hdf.view.HDFView
getListOfMetaDataViews() - Static method in class hdf.view.HDFView
getListOfPaletteViews() - Static method in class hdf.view.HDFView
getListOfTableViews() - Static method in class hdf.view.HDFView
getListOfTreeViews() - Static method in class hdf.view.HDFView
getMaxDims() - Method in class hdf.object.Dataset
  Returns the array that contains the max dimension sizes of the dataset.
getMaxMembers() - Method in class hdf.object.FileFormat
  Returns the maximum number of objects that can be loaded into memory.
getMaxMembers() - Static method in class hdf.view.ViewProperties
  Current Java applications such as HDFView cannot handle files with large number of objects such as 1,000,000 objects.
getMaxRecentFiles() - Static method in class hdf.view.ViewProperties
getMember(int) - Method in class hdf.object.Group
  Get the HObject at the specified index in this Group's member list.
getMemberCount() - Method in class hdf.object.Attribute
  Returns the number of members of the compound attribute.
getMemberCount() - Method in interface hdf.object.CompoundDataFormat
  Returns the number of members of the compound data object.
getMemberCount() - Method in class hdf.object.CompoundDS
  Returns the number of members of the compound dataset.
getMemberDims(int) - Method in class hdf.object.Attribute
  Returns the dimension sizes of the i-th member.
getMemberDims(int) - Method in interface hdf.object.CompoundDataFormat
  Returns the dimension sizes of the i-th member.
getMemberDims(int) - Method in class hdf.object.CompoundDS
  Returns the dimension sizes of the i-th member.
getMemberList() - Method in class hdf.object.Group
  Returns the list of members of this group.
getMemberNames() - Method in class hdf.object.Attribute
  Returns the names of the members of the compound attribute.
getMemberNames() - Method in interface hdf.object.CompoundDataFormat
  Returns the names of the members of the compound data object.
getMemberNames() - Method in class hdf.object.CompoundDS
  Returns the names of the members of the compound dataset.
getMemberOrders() - Method in class hdf.object.Attribute
  Returns array containing the total number of elements of the members of the compound attribute.
getMemberOrders() - Method in interface hdf.object.CompoundDataFormat
  Returns array containing the total number of elements of the members of the compound data object.
getMemberOrders() - Method in class hdf.object.CompoundDS
  Returns array containing the total number of elements of the members of the compound dataset.
getMemberTypes() - Method in class hdf.object.Attribute
  Returns an array of datatype objects of compound members.
getMemberTypes() - Method in interface hdf.object.CompoundDataFormat
  Returns an array of datatype objects of the compound members.
getMemberTypes() - Method in class hdf.object.CompoundDS
  Returns an array of datatype objects of compound members.
getMetadata() - Method in class hdf.object.Attribute
getMetadata() - Method in class hdf.object.Datatype
getMetadata() - Method in class hdf.object.fits.FitsDataset
getMetadata() - Method in class hdf.object.fits.FitsGroup
getMetadata() - Method in class hdf.object.h4.H4GRImage
getMetadata() - Method in class hdf.object.h4.H4Group
getMetadata() - Method in class hdf.object.h4.H4SDS
getMetadata() - Method in class hdf.object.h4.H4Vdata
getMetadata() - Method in class hdf.object.h5.H5CompoundDS
getMetadata() - Method in class hdf.object.h5.H5Datatype
getMetadata() - Method in class hdf.object.h5.H5Group
getMetadata() - Method in class hdf.object.h5.H5Link
getMetadata() - Method in class hdf.object.h5.H5ScalarDS
getMetadata() - Method in interface hdf.object.MetaDataContainer
  Retrieves the object's metadata, such as attributes, from the file.
getMetadata() - Method in class hdf.object.nc2.NC2Dataset
getMetadata() - Method in class hdf.object.nc2.NC2Group
getMetadata(int...) - Method in class hdf.object.fits.FitsDataset
getMetadata(int...) - Method in class hdf.object.fits.FitsDatatype
getMetadata(int...) - Method in class hdf.object.fits.FitsGroup
getMetadata(int...) - Method in class hdf.object.h4.H4Datatype
getMetadata(int...) - Method in class hdf.object.h4.H4GRImage
getMetadata(int...) - Method in class hdf.object.h4.H4Group
getMetadata(int...) - Method in class hdf.object.h4.H4SDS
getMetadata(int...) - Method in class hdf.object.h4.H4Vdata
getMetadata(int...) - Method in class hdf.object.h5.H5CompoundDS
getMetadata(int...) - Method in class hdf.object.h5.H5Datatype
getMetadata(int...) - Method in class hdf.object.h5.H5Group
getMetadata(int...) - Method in class hdf.object.h5.H5Link
getMetadata(int...) - Method in class hdf.object.h5.H5ScalarDS
getMetadata(int...) - Method in class hdf.object.nc2.NC2Dataset
getMetadata(int...) - Method in class hdf.object.nc2.NC2Datatype
getMetadata(int...) - Method in class hdf.object.nc2.NC2Group
getMetaDataView(Composite, DataViewManager, HObject) - Method in class hdf.view.DataView.DataViewFactory
getMetaDataView(Composite, DataViewManager, HObject) - Method in class hdf.view.ImageView.ImageViewFactory
getMetaDataView(Composite, DataViewManager, HObject) - Method in class hdf.view.MetaDataView.DefaultMetaDataViewFactory
getMetaDataView(Composite, DataViewManager, HObject) - Method in class hdf.view.PaletteView.PaletteViewFactory
getMetaDataView(Composite, DataViewManager, HObject) - Method in class hdf.view.TableView.TableViewFactory
getMetaDataView(Composite, DataViewManager, HObject) - Method in class hdf.view.TreeView.TreeViewFactory
getMetaDataViewList() - Static method in class hdf.view.ViewProperties
getMRF() - Static method in class hdf.view.ViewProperties
getName() - Method in class hdf.object.HObject
  Returns the name of the object.
getNativeStrPad() - Method in class hdf.object.h5.H5Datatype
getNC3Icon() - Static method in class hdf.view.ViewProperties
getNC3IconR() - Static method in class hdf.view.ViewProperties
getNetcdfFile() - Method in class hdf.object.nc2.NC2File
getNetCDFGroup() - Method in class hdf.object.nc2.NC2Group
getNextIcon() - Static method in class hdf.view.ViewProperties
getNumberOfMembers() - Method in class hdf.object.FileFormat
  Returns the number of objects in memory.
getNumberOfMembersInFile() - Method in class hdf.object.Group
  Returns the total number of members of this group in file.
getNumberOfMembersInFile() - Method in class hdf.object.h5.H5Group
getObject() - Method in class hdf.view.dialog.NewDataObjectDialog
getObject() - Method in class hdf.view.dialog.NewLinkDialog
getOID() - Method in class hdf.object.HObject
  Returns a cloned copy of the object identifier.
getOriginalClass() - Method in interface hdf.object.DataFormat
  Get runtime Class of the original data buffer if converted.
getOriginalClass() - Method in class hdf.object.Dataset
  Get Class of the original data buffer if converted.
getPalette() - Method in class hdf.object.fits.FitsDataset
getPalette() - Method in class hdf.object.h4.H4GRImage
getPalette() - Method in class hdf.object.h4.H4SDS
getPalette() - Method in class hdf.object.h5.H5ScalarDS
getPalette() - Method in class hdf.object.nc2.NC2Dataset
getPalette() - Method in class hdf.object.ScalarDS
  Returns the palette of this scalar dataset or null if palette does not exist.
getPalette() - Method in class hdf.view.ImageView.DefaultImageView
getPalette() - Method in interface hdf.view.ImageView.ImageView
getPaletteIcon() - Static method in class hdf.view.ViewProperties
getPaletteList() - Static method in class hdf.view.ViewProperties
getPaletteName(int) - Method in class hdf.object.h5.H5ScalarDS
getPaletteName(int) - Method in class hdf.object.ScalarDS
  Get the name of a specific image palette from file.
getPaletteRefs() - Method in class hdf.object.fits.FitsDataset
getPaletteRefs() - Method in class hdf.object.h4.H4GRImage
getPaletteRefs() - Method in class hdf.object.h4.H4SDS
getPaletteRefs() - Method in class hdf.object.h5.H5ScalarDS
getPaletteRefs() - Method in class hdf.object.nc2.NC2Dataset
  returns the byte array of palette refs.
getPaletteRefs() - Method in class hdf.object.ScalarDS
  Returns the byte array of palette refs.
getPaletteView(Shell, DataViewManager, ImageView) - Method in class hdf.view.DataView.DataViewFactory
getPaletteView(Shell, DataViewManager, ImageView) - Method in class hdf.view.ImageView.ImageViewFactory
getPaletteView(Shell, DataViewManager, ImageView) - Method in class hdf.view.MetaDataView.MetaDataViewFactory
getPaletteView(Shell, DataViewManager, ImageView) - Method in class hdf.view.PaletteView.DefaultPaletteViewFactory
getPaletteView(Shell, DataViewManager, ImageView) - Method in class hdf.view.TableView.TableViewFactory
getPaletteView(Shell, DataViewManager, ImageView) - Method in class hdf.view.TreeView.TreeViewFactory
getPaletteViewList() - Static method in class hdf.view.ViewProperties
getParent() - Method in class hdf.object.Group
getParentGroup() - Method in class hdf.view.dialog.NewDataObjectDialog
getParentGroup() - Method in class hdf.view.dialog.NewLinkDialog
getParentObject() - Method in class hdf.object.Attribute
  Returns the HObject to which this Attribute is currently "attached".
getPasteIcon() - Static method in class hdf.view.ViewProperties
getPath() - Method in class hdf.object.HObject
  Returns the group path of the object.
getPdfIcon() - Static method in class hdf.view.ViewProperties
getPreviousIcon() - Static method in class hdf.view.ViewProperties
getProperty(String) - Method in class hdf.object.Attribute
  get a property for a given key.
getPropertyFile() - Static method in class hdf.view.ViewProperties
getPropertyKeys() - Method in class hdf.object.Attribute
  get all property keys.
getPropertyVersionHDF4() - Static method in class hdf.HDFVersions
getPropertyVersionHDF5() - Static method in class hdf.HDFVersions
getPropertyVersionJava() - Static method in class hdf.HDFVersions
getPropertyVersionView() - Static method in class hdf.HDFVersions
getQuestionIcon() - Static method in class hdf.view.ViewProperties
getRank() - Method in interface hdf.object.DataFormat
  Returns the rank (number of dimensions) of the data object.
getRank() - Method in class hdf.object.Dataset
  Returns the rank (number of dimensions) of the dataset.
getRecordCount() - Method in class hdf.object.h4.H4Vdata
  Returns the number of records.
getReferenceType() - Method in class hdf.object.Datatype
  If the datatype is a reference, then return the type.
getReferenceType() - Method in class hdf.object.h5.H5Datatype
getRootObject() - Method in class hdf.object.FileFormat
  Returns the root object for the file associated with this instance.
getRootObject() - Method in class hdf.object.fits.FitsFile
getRootObject() - Method in class hdf.object.h4.H4File
getRootObject() - Method in class hdf.object.h5.H5File
  Returns the root object of the open HDF5 File.
getRootObject() - Method in class hdf.object.nc2.NC2File
getRowCount() - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
getRowCount() - Method in class hdf.view.TableView.DefaultBaseTableView.RowHeaderDataProvider
getSDAccessID() - Method in class hdf.object.h4.H4File
  Returns the SDS identifier, which is returned from SDstart(fname, flag).
getSelectedArea() - Method in class hdf.view.ImageView.DefaultImageView
  returns the selected area of the image
getSelectedArea() - Method in interface hdf.view.ImageView.ImageView
  Returns the selected area of the image
getSelectedColumnCount() - Method in class hdf.view.TableView.DefaultBaseTableView
getSelectedColumnCount() - Method in interface hdf.view.TableView.TableView
getSelectedData() - Method in class hdf.view.ImageView.DefaultImageView
  Returns the selected data values.
getSelectedData() - Method in interface hdf.view.ImageView.ImageView
getSelectedData() - Method in class hdf.view.TableView.DefaultCompoundDSTableView
getSelectedData() - Method in class hdf.view.TableView.DefaultScalarDSTableView
  Returns the selected data values of the ScalarDS
getSelectedData() - Method in interface hdf.view.TableView.TableView
getSelectedDims() - Method in interface hdf.object.DataFormat
  Returns the dimension sizes of the selected subset.
getSelectedDims() - Method in class hdf.object.Dataset
  Returns the dimension sizes of the selected subset.
getSelectedFile() - Method in class hdf.view.TreeView.DefaultTreeView
  Gets the selected file.
getSelectedFile() - Method in interface hdf.view.TreeView.TreeView
  Gets the selected the file.
getSelectedIndex() - Method in interface hdf.object.DataFormat
  Returns the indices of display order.
getSelectedIndex() - Method in class hdf.object.Dataset
  Returns the indices of display order.
getSelectedMemberCount() - Method in class hdf.object.Attribute
  Returns the number of selected members of the compound attribute.
getSelectedMemberCount() - Method in interface hdf.object.CompoundDataFormat
  Returns the number of selected members of the compound data object.
getSelectedMemberCount() - Method in class hdf.object.CompoundDS
  Returns the number of selected members of the compound dataset.
getSelectedMemberNames() - Method in class hdf.object.Attribute
  Returns an array of the names of the selected members of the compound dataset.
getSelectedMemberNames() - Method in interface hdf.object.CompoundDataFormat
  Returns an array of the names of the selected compound members.
getSelectedMemberNames() - Method in class hdf.object.CompoundDS
  Returns an array of the names of the selected members of the compound dataset.
getSelectedMemberOrders() - Method in class hdf.object.Attribute
  Returns array containing the total number of elements of the selected members of the compound attribute.
getSelectedMemberOrders() - Method in interface hdf.object.CompoundDataFormat
  Returns array containing the total number of elements of the selected members of the compound data object.
getSelectedMemberOrders() - Method in class hdf.object.CompoundDS
  Returns array containing the total number of elements of the selected members of the compound dataset.
getSelectedMemberTypes() - Method in class hdf.object.Attribute
  Returns an array of datatype objects of selected compound members.
getSelectedMemberTypes() - Method in interface hdf.object.CompoundDataFormat
  Returns an array of datatype objects of the selected compound members.
getSelectedMemberTypes() - Method in class hdf.object.CompoundDS
  Returns an array of datatype objects of selected compound members.
getSelectedRowCount() - Method in class hdf.view.TableView.DefaultBaseTableView
getSelectedRowCount() - Method in interface hdf.view.TableView.TableView
getSelectionLayer() - Method in class hdf.view.TableView.DefaultBaseTableView
getSize(long) - Method in class hdf.object.Dataset
  Returns the size in bytes of a given datatype.
getSize(long) - Method in class hdf.object.h5.H5CompoundDS
getSrbAccount() - Static method in class hdf.view.ViewProperties
getStartDims() - Method in interface hdf.object.DataFormat
  Returns the starting position of a selected subset.
getStartDims() - Method in class hdf.object.Dataset
  Returns the starting position of a selected subset.
getStartMembers() - Method in class hdf.object.FileFormat
  Returns the index of the starting object to be loaded into memory.
getStartMembers() - Static method in class hdf.view.ViewProperties
  Current Java applications such as HDFView cannot handle files with large number of objects such as 1,000,000 objects.
getStorage() - Method in class hdf.object.Dataset
  Returns the string representation of storage information.
getStorageLayout() - Method in class hdf.object.Dataset
  Returns the string representation of storage layout information.
getStride() - Method in interface hdf.object.DataFormat
  Returns the selectedStride of the selected dataset.
getStride() - Method in class hdf.object.Dataset
  Returns the selectedStride of the selected dataset.
getTable() - Method in class hdf.view.TableView.DefaultBaseTableView
getTable() - Method in interface hdf.view.TableView.TableView
getTableIcon() - Static method in class hdf.view.ViewProperties
getTableIconA() - Static method in class hdf.view.ViewProperties
getTableView(DataViewManager, HashMap) - Method in class hdf.view.DataView.DataViewFactory
getTableView(DataViewManager, HashMap) - Method in class hdf.view.ImageView.ImageViewFactory
getTableView(DataViewManager, HashMap) - Method in class hdf.view.MetaDataView.MetaDataViewFactory
getTableView(DataViewManager, HashMap) - Method in class hdf.view.PaletteView.PaletteViewFactory
getTableView(DataViewManager, HashMap) - Method in class hdf.view.TableView.DefaultTableViewFactory
getTableView(DataViewManager, HashMap) - Method in class hdf.view.TreeView.TreeViewFactory
getTableViewList() - Static method in class hdf.view.ViewProperties
getTestState() - Method in class hdf.view.HDFView
getTextIcon() - Static method in class hdf.view.ViewProperties
getTextIconA() - Static method in class hdf.view.ViewProperties
getTotalSelectedSpacePoints(long, long[], long[], long[], long[], long[]) - Static method in class hdf.object.h5.H5Utils
getTree() - Method in class hdf.view.TreeView.DefaultTreeView
getTree() - Method in interface hdf.view.TreeView.TreeView
getTreeView() - Method in interface hdf.view.DataView.DataViewManager
getTreeView() - Method in class hdf.view.HDFView
getTreeView(Composite, DataViewManager) - Method in class hdf.view.DataView.DataViewFactory
getTreeView(Composite, DataViewManager) - Method in class hdf.view.ImageView.ImageViewFactory
getTreeView(Composite, DataViewManager) - Method in class hdf.view.MetaDataView.MetaDataViewFactory
getTreeView(Composite, DataViewManager) - Method in class hdf.view.PaletteView.PaletteViewFactory
getTreeView(Composite, DataViewManager) - Method in class hdf.view.TableView.TableViewFactory
getTreeView(Composite, DataViewManager) - Method in class hdf.view.TreeView.DefaultTreeViewFactory
getTreeViewList() - Static method in class hdf.view.ViewProperties
getUrlBar() - Method in class hdf.view.HDFView
getUrlIcon() - Static method in class hdf.view.ViewProperties
getUsersGuide() - Static method in class hdf.view.ViewProperties
getVideoIcon() - Static method in class hdf.view.ViewProperties
getViewRoot() - Static method in class hdf.view.ViewProperties
getVirtualFilename(int) - Method in class hdf.object.Dataset
getVirtualFilename(int) - Method in class hdf.object.h5.H5CompoundDS
getVirtualFilename(int) - Method in class hdf.object.h5.H5ScalarDS
getVirtualMaps() - Method in class hdf.object.Dataset
getVirtualMaps() - Method in class hdf.object.h5.H5CompoundDS
getVirtualMaps() - Method in class hdf.object.h5.H5ScalarDS
getWidth() - Method in interface hdf.object.DataFormat
  Returns the dimension size of the horizontal axis.
getWidth() - Method in class hdf.object.Dataset
  Returns the dimension size of the horizontal axis.
getWorkDir() - Static method in class hdf.view.ViewProperties
getXlsIcon() - Static method in class hdf.view.ViewProperties
getZoominIcon() - Static method in class hdf.view.ViewProperties
getZoomoutIcon() - Static method in class hdf.view.ViewProperties
Group - Class in hdf.object
  Group is an abstract class.
Group(FileFormat, String, String, Group) - Constructor for class hdf.object.Group
  Constructs an instance of the group with specific name, path and parent group.
Group(FileFormat, String, String, Group, long[]) - Constructor for class hdf.object.Group
  Deprecated.
  Not for public use in the future.
  Using `Group(FileFormat, String, String, Group)`

## H

H4Attribute - Class in hdf.object.h4
  An attribute is a (name, value) pair of metadata attached to a primary data object such as a dataset, group or named datatype.
H4Attribute(HObject, String, Datatype, long[]) - Constructor for class hdf.object.h4.H4Attribute
  Create an attribute with specified name, data type and dimension sizes.
H4Attribute(HObject, String, Datatype, long[], Object) - Constructor for class hdf.object.h4.H4Attribute
  Create an attribute with specific name and value.
H4Datatype - Class in hdf.object.h4
  This class defines HDF4 data type characteristics and APIs for a data type.
H4Datatype(int, int, int, int) - Constructor for class hdf.object.h4.H4Datatype
  Constructs a H4Datatype with specified class, size, byte order and sign.
H4Datatype(long) - Constructor for class hdf.object.h4.H4Datatype
  Constructs a H4Datatype with a given native datatype identifier.
H4File - Class in hdf.object.h4
  This class provides file level APIs.
H4File() - Constructor for class hdf.object.h4.H4File
  Creates an H4File with read write access.
H4File(String) - Constructor for class hdf.object.h4.H4File
  Creates an H4File with read write access.
H4File(String, int) - Constructor for class hdf.object.h4.H4File
  Creates an H4File instance with specified file name and access.
H4GRImage - Class in hdf.object.h4
  H4GRImage describes an HDF4 general raster(GR) image and operations performed on the GR image.
H4GRImage(FileFormat, String, String) - Constructor for class hdf.object.h4.H4GRImage
H4GRImage(FileFormat, String, String, long[]) - Constructor for class hdf.object.h4.H4GRImage
  Creates a H4GRImage object with specific name, path, and object ID.
H4Group - Class in hdf.object.h4
  An H4Group is a vgroup in HDF4, inheriting from Group.
H4Group(FileFormat, String, String, Group) - Constructor for class hdf.object.h4.H4Group
H4Group(FileFormat, String, String, Group, long[]) - Constructor for class hdf.object.h4.H4Group
  Creates a group object with specific name, path, and parent.
H4SDS - Class in hdf.object.h4
  H4SDS describes HDF4 Scientific Data Sets (SDS) and operations performed on the SDS.
H4SDS(FileFormat, String, String) - Constructor for class hdf.object.h4.H4SDS
H4SDS(FileFormat, String, String, long[]) - Constructor for class hdf.object.h4.H4SDS
  Creates an H4SDS object with specific name and path.
H4Vdata - Class in hdf.object.h4
  H4Vdata describes a multi-dimension array of HDF4 vdata, inheriting CompoundDS.
H4Vdata(FileFormat, String, String) - Constructor for class hdf.object.h4.H4Vdata
H4Vdata(FileFormat, String, String, long[]) - Constructor for class hdf.object.h4.H4Vdata
  Creates an H4Vdata object with specific name and path.
H5Attribute - Class in hdf.object.h5
  An attribute is a (name, value) pair of metadata attached to a primary data object such as a dataset, group or named datatype.
H5Attribute(HObject, String, Datatype, long[]) - Constructor for class hdf.object.h5.H5Attribute
  Create an attribute with specified name, data type and dimension sizes.
H5Attribute(HObject, String, Datatype, long[], Object) - Constructor for class hdf.object.h5.H5Attribute
  Create an attribute with specific name and value.
H5CompoundDS - Class in hdf.object.h5
  The H5CompoundDS class defines an HDF5 dataset of compound datatypes.
H5CompoundDS(FileFormat, String, String) - Constructor for class hdf.object.h5.H5CompoundDS
  Constructs an instance of a HDF5 compound dataset with given file, dataset name and path.
H5CompoundDS(FileFormat, String, String, long[]) - Constructor for class hdf.object.h5.H5CompoundDS
  Deprecated.
  Not for public use in the future.
  Using `H5CompoundDS(FileFormat, String, String)`
H5CompoundDS.IO_TYPE - Enum Class in hdf.object.h5
H5Datatype - Class in hdf.object.h5
  This class defines HDF5 datatype characteristics and APIs for a data type.
H5Datatype(int, int, int, int) - Constructor for class hdf.object.h5.H5Datatype
  Constructs a Datatype with specified class, size, byte order and sign.
H5Datatype(int, int, int, int, Datatype) - Constructor for class hdf.object.h5.H5Datatype
  Constructs a Datatype with specified class, size, byte order and sign.
H5Datatype(int, int, int, int, Datatype, Datatype) - Constructor for class hdf.object.h5.H5Datatype
  Constructs a Datatype with specified class, size, byte order and sign.
H5Datatype(FileFormat, long) - Constructor for class hdf.object.h5.H5Datatype
  Constructs a Datatype with a given native datatype identifier.
H5Datatype(FileFormat, long, Datatype) - Constructor for class hdf.object.h5.H5Datatype
  Constructs a Datatype with a given native datatype identifier.
H5Datatype(FileFormat, String, String) - Constructor for class hdf.object.h5.H5Datatype
  Constructs an named HDF5 data type object for a given file, dataset name and group path.
H5Datatype(FileFormat, String, String, long[]) - Constructor for class hdf.object.h5.H5Datatype
  Deprecated.
  Not for public use in the future.
  Using `H5Datatype(FileFormat, String, String)`
H5File - Class in hdf.object.h5
  H5File is an implementation of the FileFormat class for HDF5 files.
H5File() - Constructor for class hdf.object.h5.H5File
  Constructs an H5File instance with an empty file name and read-only access.
H5File(String) - Constructor for class hdf.object.h5.H5File
  Constructs an H5File instance with specified file name and read/write access.
H5File(String, int) - Constructor for class hdf.object.h5.H5File
  Constructs an H5File instance with specified file name and access.
H5Group - Class in hdf.object.h5
  An H5Group object represents an existing HDF5 group in file.
H5Group(FileFormat, String, String, Group) - Constructor for class hdf.object.h5.H5Group
  Constructs an HDF5 group with specific name, path, and parent.
H5Group(FileFormat, String, String, Group, long[]) - Constructor for class hdf.object.h5.H5Group
  Deprecated.
  Not for public use in the future.
  Using `H5Group(FileFormat, String, String, Group)`
H5Link - Class in hdf.object.h5
  An H5Link object represents an existing HDF5 object in file.
H5Link(FileFormat, String, String) - Constructor for class hdf.object.h5.H5Link
  Constructs an HDF5 link with specific name, path, and parent.
H5Link(FileFormat, String, String, long[]) - Constructor for class hdf.object.h5.H5Link
H5ScalarDS - Class in hdf.object.h5
  H5ScalarDS describes a multi-dimension array of HDF5 scalar or atomic data types, such as byte, int, short, long, float, double and string, and operations performed on the scalar dataset.
H5ScalarDS(FileFormat, String, String) - Constructor for class hdf.object.h5.H5ScalarDS
  Constructs an instance of a H5 scalar dataset with given file, dataset name and path.
H5ScalarDS(FileFormat, String, String, long[]) - Constructor for class hdf.object.h5.H5ScalarDS
  Deprecated.
  Not for public use in the future.
  Using `H5ScalarDS(FileFormat, String, String)`
H5ScalarDS.IO_TYPE - Enum Class in hdf.object.h5
H5Utils - Class in hdf.object.h5
H5Utils() - Constructor for class hdf.object.h5.H5Utils
hasAlpha(Image) - Static method in class hdf.view.Tools
  This method returns true if the specified image has transparent pixels.
hasAttribute() - Method in class hdf.object.Attribute
hasAttribute() - Method in class hdf.object.fits.FitsDataset
hasAttribute() - Method in class hdf.object.fits.FitsDatatype
hasAttribute() - Method in class hdf.object.fits.FitsGroup
hasAttribute() - Method in class hdf.object.h4.H4Datatype
hasAttribute() - Method in class hdf.object.h4.H4GRImage
hasAttribute() - Method in class hdf.object.h4.H4Group
hasAttribute() - Method in class hdf.object.h4.H4SDS
hasAttribute() - Method in class hdf.object.h4.H4Vdata
hasAttribute() - Method in class hdf.object.h5.H5CompoundDS
hasAttribute() - Method in class hdf.object.h5.H5Datatype
hasAttribute() - Method in class hdf.object.h5.H5Group
hasAttribute() - Method in class hdf.object.h5.H5Link
hasAttribute() - Method in class hdf.object.h5.H5ScalarDS
hasAttribute() - Method in interface hdf.object.MetaDataContainer
  Check if the object has any attributes attached.
hasAttribute() - Method in class hdf.object.nc2.NC2Dataset
hasAttribute() - Method in class hdf.object.nc2.NC2Datatype
hasAttribute() - Method in class hdf.object.nc2.NC2Group
hasDimension() - Method in class hdf.object.nc2.NC2Group
hashCode() - Method in class hdf.object.Attribute
hashCode() - Method in class hdf.object.HObject
hdf - package hdf
hdf.object - package hdf.object
hdf.object.fits - package hdf.object.fits
hdf.object.h4 - package hdf.object.h4
hdf.object.h5 - package hdf.object.h5
hdf.object.nc2 - package hdf.object.nc2
hdf.view - package hdf.view
hdf.view.DataView - package hdf.view.DataView
hdf.view.dialog - package hdf.view.dialog
hdf.view.HelpView - package hdf.view.HelpView
hdf.view.ImageView - package hdf.view.ImageView
hdf.view.MetaDataView - package hdf.view.MetaDataView
hdf.view.PaletteView - package hdf.view.PaletteView
hdf.view.TableView - package hdf.view.TableView
hdf.view.TreeView - package hdf.view.TreeView
HDFDataProvider(Datatype, Object, boolean) - Constructor for class hdf.view.TableView.DataProviderFactory.HDFDataProvider
HDFDataValidator(Datatype) - Constructor for class hdf.view.TableView.DataValidatorFactory.HDFDataValidator
HDFDisplayConverter(Datatype) - Constructor for class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter
HDFVersions - Class in hdf
HDFVersions() - Constructor for class hdf.HDFVersions
HDFView - Class in hdf.view
  HDFView is the main class of this HDF visual tool.
HDFView(String, String) - Constructor for class hdf.view.HDFView
  Constructs HDFView with a given root directory, where the HDFView is installed, and opens the given files in the viewer.
HelpView - Interface in hdf.view.HelpView
  The helpview interface for displaying user help information
HEXCHARS - Static variable in class hdf.view.Tools
HISTOGRAM - Static variable in class hdf.view.Chart
  histogram style chart
HObject - Class in hdf.object
  The HObject class is the root class of all the HDF data objects.
HObject() - Constructor for class hdf.object.HObject
  Constructs an instance of a data object without name and path.
HObject(FileFormat, String, String) - Constructor for class hdf.object.HObject
  Constructs an instance of a data object with specific name and path.
HObject(FileFormat, String, String, long[]) - Constructor for class hdf.object.HObject
  Deprecated.

## I

IMAGE - Enum constant in enum class hdf.view.TableView.DefaultBaseTableView.ViewType
IMAGE - Enum constant in enum class hdf.view.ViewProperties.DataViewType
imageComplete(int) - Method in class hdf.view.ImageView.DefaultImageView.FlipFilter
imageComplete(int) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter
ImageConversionDialog - Class in hdf.view.dialog
  ImageConversionDialog shows a message dialog requesting user input for converting files.
ImageConversionDialog(Shell, String, String, String, List<FileFormat>) - Constructor for class hdf.view.dialog.ImageConversionDialog
  Constructs a FileConversionDialog
imageDataRange - Variable in class hdf.object.ScalarDS
  The min-max range of image data values.
ImageView - Interface in hdf.view.ImageView
  The image view interface for displaying image object
ImageViewFactory - Class in hdf.view.ImageView
ImageViewFactory() - Constructor for class hdf.view.ImageView.ImageViewFactory
importBinaryData() - Method in class hdf.view.TableView.DefaultBaseTableView
  Import data values from binary file.
importTextData(String) - Method in class hdf.view.TableView.DefaultBaseTableView
  Import data values from text file.
indexBase - Variable in class hdf.view.TableView.DefaultBaseTableView
INDEXBASE1 - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY
indexBaseGroup - Variable in class hdf.view.TableView.DefaultBaseTableView
INFO - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY
init() - Method in class hdf.object.Attribute
init() - Method in interface hdf.object.DataFormat
init() - Method in class hdf.object.fits.FitsDataset
init() - Method in class hdf.object.h4.H4Attribute
init() - Method in class hdf.object.h4.H4GRImage
init() - Method in class hdf.object.h4.H4SDS
  Initializes the H4SDS such as dimension size of this dataset.
init() - Method in class hdf.object.h4.H4Vdata
  Initializes the H4Vdata such as dimension sizes of this dataset.
init() - Method in class hdf.object.h5.H5Attribute
init() - Method in class hdf.object.h5.H5CompoundDS
  Retrieves datatype and dataspace information from file and sets the dataset in memory.
init() - Method in class hdf.object.h5.H5ScalarDS
  Retrieves datatype and dataspace information from file and sets the dataset in memory.
init() - Method in class hdf.object.nc2.NC2Attribute
init() - Method in class hdf.object.nc2.NC2Dataset
  Retrieve and initialize dimensions and member information.
inited - Variable in class hdf.object.Dataset
  Flag to indicate if this dataset has been initialized
initLibBounds() - Method in class hdf.object.FileFormat
  Initialize the bounds of library versions
initLibBounds() - Method in class hdf.object.h5.H5File
  Initialize the bounds of library versions
InputDialog - Class in hdf.view.dialog
  Custom SWT dialog to allow the user to input strings for various uses.
InputDialog(Shell) - Constructor for class hdf.view.dialog.InputDialog
InputDialog(Shell, String, String) - Constructor for class hdf.view.dialog.InputDialog
InputDialog(Shell, String, String, int) - Constructor for class hdf.view.dialog.InputDialog
InputDialog(Shell, String, String, String) - Constructor for class hdf.view.dialog.InputDialog
InputDialog(Shell, String, String, String, int) - Constructor for class hdf.view.dialog.InputDialog
interlace - Variable in class hdf.object.ScalarDS
  The interlace mode of the stored raster image data.
INTERLACE_LINE - Static variable in class hdf.object.ScalarDS
  Indicates that each pixel component of RGB is stored as a scan line.
INTERLACE_PIXEL - Static variable in class hdf.object.ScalarDS
  Indicates that the pixel RGB values are contiguous.
INTERLACE_PLANE - Static variable in class hdf.object.ScalarDS
  Indicates that each pixel component of RGB is stored as a plane.
isApplyBitmaskOnly() - Method in class hdf.view.dialog.DataOptionDialog
isArray() - Method in class hdf.object.Datatype
  Checks if this datatype is an array type.
isAutoContrast() - Static method in class hdf.view.ViewProperties
  Returns true if auto contrast is used in image processing.
isBitField() - Method in class hdf.object.Datatype
  Checks if this datatype is a bitfield type.
isCancelled() - Method in class hdf.view.dialog.DataOptionDialog
isChar() - Method in class hdf.object.Datatype
  Checks if this datatype is a character type.
isCompound() - Method in class hdf.object.Datatype
  Checks if this datatype is an compound type.
isContainerType - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
isConverted() - Method in class hdf.view.dialog.MathConversionDialog
isConvertEnum() - Static method in class hdf.view.ViewProperties
isDataLoaded - Variable in class hdf.object.Dataset
  Flag to indicate if data values are loaded into memory.
isDataTransposed - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
isDataTransposed - Variable in class hdf.view.TableView.DefaultBaseTableView
isDefaultImageOrder - Variable in class hdf.object.ScalarDS
  Flag to indicate if the dataset is displayed as an image with default order of dimensions.
isDefaultImageOrder() - Method in class hdf.object.ScalarDS
  Returns true if this dataset is displayed as an image with default image order.
isDisplayTypeChar - Variable in class hdf.view.TableView.DefaultBaseTableView
isDisplayTypeChar() - Method in class hdf.view.dialog.DataOptionDialog
isEnum - Variable in class hdf.view.dialog.NewDataObjectDialog
isEnum() - Method in class hdf.object.Datatype
  Checks if this datatype is a enum type.
isEnumConverted - Variable in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter
isEnumConverted - Variable in class hdf.view.TableView.DefaultBaseTableView
isExtensionListInDescription() - Method in class hdf.view.DefaultFileFilter
isFileConverted() - Method in class hdf.view.dialog.ImageConversionDialog
isFillValueConverted - Variable in class hdf.object.ScalarDS
  Flag to indicate if the FillValue is converted from unsigned C.
isFloat() - Method in class hdf.object.Datatype
  Checks if this datatype is a floating-point type.
isFontChanged() - Method in class hdf.view.dialog.UserOptionsGeneralPage
isH4 - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView
isH5 - Variable in class hdf.view.dialog.NewDataObjectDialog
isH5 - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView
isHDF4(String) - Static method in class hdf.view.Tools
  look at the first 4 bytes of the file to see if it is an HDF4 file.
isHDF5(String) - Static method in class hdf.view.Tools
  look at the first 8 bytes of the file to see if it is an HDF5 file.
isImage - Variable in class hdf.object.ScalarDS
  True if this dataset is an image.
isImage() - Method in class hdf.object.ScalarDS
  Returns true if this dataset is an image.
isImageDisplay - Variable in class hdf.object.ScalarDS
  Flag to indicate if the dataset is displayed as an image.
isImageDisplay() - Method in class hdf.object.ScalarDS
  Returns true if this dataset is displayed as an image.
isImageDisplay() - Method in class hdf.view.dialog.DataOptionDialog
isIndexBase1() - Method in class hdf.view.dialog.DataOptionDialog
isIndexBase1() - Static method in class hdf.view.ViewProperties
isInited() - Method in interface hdf.object.DataFormat
isInited() - Method in class hdf.object.Dataset
isInteger() - Method in class hdf.object.Datatype
  Checks if this datatype is an integer type.
isMemberSelected - Variable in class hdf.object.Attribute
  The array to store flags to indicate if a member of this compound attribute is selected for read/write.
isMemberSelected - Variable in class hdf.object.CompoundDS
  The array to store flags to indicate if a member of this compound dataset is selected for read/write.
isMemberSelected(int) - Method in class hdf.object.Attribute
  Checks if a member of the compound attribute is selected for read/write.
isMemberSelected(int) - Method in interface hdf.object.CompoundDataFormat
  Checks if a member of the compound data object is selected for read/write.
isMemberSelected(int) - Method in class hdf.object.CompoundDS
  Checks if a member of the compound dataset is selected for read/write.
isN3 - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView
isNamed - Variable in class hdf.object.Datatype
  Determines whether this datatype is a named datatype
isNamed() - Method in class hdf.object.Datatype
  Checks if this datatype is a named type.
isNaNINF(double) - Static method in class hdf.view.Tools
  Check if a given number if NaN or INF.
isNaturalOrder - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
isNetcdf(String) - Static method in class hdf.view.Tools
  look at the first 4 bytes of the file to see if it is a netCDF file byte[0]=67, byte[1]=68, byte[2]=70, byte[3]=1 or
isObjRef - Variable in class hdf.view.TableView.DefaultBaseTableView
isOpaque() - Method in class hdf.object.Datatype
  Checks if this datatype is a opaque type.
isPaletteChanged - Variable in class hdf.view.PaletteView.DefaultPaletteView
isPlaneInterlace() - Method in class hdf.view.ImageView.DefaultImageView
isPlaneInterlace() - Method in interface hdf.view.ImageView.ImageView
isReadOnly - Variable in class hdf.object.FileFormat
  Flag indicating if the file access is read-only.
isReadOnly - Variable in class hdf.view.TableView.DefaultBaseTableView
isReadOnly() - Method in class hdf.object.FileFormat
  Returns true if the file access is read-only.
isReadOnly() - Static method in class hdf.view.ViewProperties
  Returns true if default file access is read only.
isRef() - Method in class hdf.object.Datatype
  Checks if this datatype is a reference type.
isReference() - Method in class hdf.object.h5.H5Datatype
isRefObj() - Method in class hdf.object.h5.H5Datatype
isRegRef - Variable in class hdf.view.TableView.DefaultBaseTableView
isRegRef() - Method in class hdf.object.h5.H5Datatype
isRoot() - Method in class hdf.object.Group
  Checks if it is a root group.
isScalar - Variable in class hdf.object.Attribute
  Flag to indicate if the attribute data is a single scalar point
isScalar() - Method in class hdf.object.Attribute
isString() - Method in class hdf.object.Datatype
  Checks if this datatype is a string type.
isString(long) - Method in class hdf.object.Dataset
  Checks if a given datatype is a string.
isString(long) - Method in class hdf.object.h5.H5CompoundDS
isText - Variable in class hdf.object.ScalarDS
  True if this dataset is ASCII text.
isText() - Method in class hdf.object.Datatype
isText() - Method in class hdf.object.fits.FitsDatatype
isText() - Method in class hdf.object.h4.H4Datatype
isText() - Method in class hdf.object.h5.H5Datatype
isText() - Method in class hdf.object.nc2.NC2Datatype
isThisType(FileFormat) - Method in class hdf.object.FileFormat
  Checks if the class implements the specified FileFormat.
isThisType(FileFormat) - Method in class hdf.object.fits.FitsFile
  Checks if the given file format is a Fits file.
isThisType(FileFormat) - Method in class hdf.object.h4.H4File
  Checks if the given file format is an HDF4 file.
isThisType(FileFormat) - Method in class hdf.object.h5.H5File
  Checks if the specified FileFormat instance has the HDF5 format.
isThisType(FileFormat) - Method in class hdf.object.nc2.NC2File
  Checks if the given file format is a NetCDF3 file.
isThisType(String) - Method in class hdf.object.FileFormat
  Checks if the implementing FileFormat class matches the format of the specified file.
isThisType(String) - Method in class hdf.object.fits.FitsFile
  Checks if a given file is a Fits file.
isThisType(String) - Method in class hdf.object.h4.H4File
  Checks if the given file is an HDF4 file or netCDF.
isThisType(String) - Method in class hdf.object.h5.H5File
  Checks if the specified file has the HDF5 format.
isThisType(String) - Method in class hdf.object.nc2.NC2File
  Checks if the given file is a NetCDF file.
isTransposed() - Method in class hdf.view.dialog.DataOptionDialog
isTrueColor - Variable in class hdf.object.ScalarDS
  True if this dataset is a true color image.
isTrueColor() - Method in class hdf.object.ScalarDS
isTrueColor() - Method in class hdf.view.ImageView.DefaultImageView
isTrueColor() - Method in interface hdf.view.ImageView.ImageView
isUnsigned() - Method in class hdf.object.Datatype
  Checks if this datatype is unsigned.
isUnsigned() - Method in class hdf.object.fits.FitsDatatype
isUnsigned() - Method in class hdf.object.h4.H4Datatype
isUnsigned() - Method in class hdf.object.nc2.NC2Datatype
isUnsigned(long) - Static method in class hdf.object.h4.H4Datatype
  Checks if the datatype is an unsigned integer.
isUnsigned(long) - Static method in class hdf.object.h5.H5Datatype
  Checks if a datatype specified by the identifier is an unsigned integer.
isUserGuideChanged() - Method in class hdf.view.dialog.UserOptionsGeneralPage
isValueChanged - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
isVariableStr - Variable in class hdf.object.Datatype
isVarStr() - Method in class hdf.object.Datatype
  Checks if this datatype is a variable-length string type.
isVirtual() - Method in class hdf.object.Dataset
isVirtual() - Method in class hdf.object.h5.H5CompoundDS
isVirtual() - Method in class hdf.object.h5.H5ScalarDS
isVLen - Variable in class hdf.view.dialog.NewDataObjectDialog
isVLEN - Variable in class hdf.object.Datatype
  Determines whether this datatype is a variable-length type.
isVLEN() - Method in class hdf.object.Datatype
  Checks if this datatype is a variable-length type.
isVlenStr - Variable in class hdf.view.dialog.NewDataObjectDialog
isWorkDirChanged() - Method in class hdf.view.dialog.UserOptionsGeneralPage
itransform(double, double, double[]) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter

## L

launchBrowser(String) - Static method in class hdf.view.Tools
  Launch default browser for a given URL.
lengthField - Variable in class hdf.view.dialog.NewDataObjectDialog
  TextField for entering the length of the data array or string.
LIBVER_EARLIEST - Static variable in class hdf.object.h5.H5File
LIBVER_LATEST - Static variable in class hdf.object.h5.H5File
LIBVER_V110 - Static variable in class hdf.object.h5.H5File
LIBVER_V18 - Static variable in class hdf.object.h5.H5File
LINE_COLORS - Static variable in class hdf.view.Chart
  The default colors of lines for selected columns
LINEPLOT - Static variable in class hdf.view.Chart
  line style chart
LINK_TYPE_EXTERNAL - Static variable in class hdf.object.Group
LINK_TYPE_HARD - Static variable in class hdf.object.Group
LINK_TYPE_SOFT - Static variable in class hdf.object.Group
linkTargetObjName - Variable in class hdf.object.HObject
  The name of the Target Object that is being linked to.
load() - Method in class hdf.view.dialog.UserOptionsGeneralPage
  Loads all stored values in the `FieldEditor`s.
load() - Method in class hdf.view.dialog.UserOptionsHDFPage
  Loads all stored values in the `FieldEditor`s.
load() - Method in class hdf.view.dialog.UserOptionsViewModulesPage
  Loads all stored values in the `FieldEditor`s.
load() - Method in class hdf.view.ViewProperties
  Load user properties from property file
loadData(DataFormat) - Method in class hdf.view.TableView.DefaultBaseTableView
loadData(DataFormat) - Method in class hdf.view.TableView.DefaultCompoundDSTableView
loadData(DataFormat) - Method in class hdf.view.TableView.DefaultScalarDSTableView
loadExtClass() - Static method in class hdf.view.ViewProperties
  load module classes
loadIcons() - Static method in class hdf.view.ViewProperties
log - Variable in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter
log - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
log - Variable in class hdf.view.TableView.DataValidatorFactory.HDFDataValidator

## M

main(String[]) - Static method in class hdf.view.HDFView
  The starting point of this application.
MathConversionDialog - Class in hdf.view.dialog
  MathConversionDialog shows a message dialog requesting user input for math conversion.
MathConversionDialog(Shell, Object) - Constructor for class hdf.view.dialog.MathConversionDialog
  Constructs MathConversionDialog.
MAX_INT16 - Static variable in class hdf.view.Tools
MAX_INT32 - Static variable in class hdf.view.Tools
MAX_INT64 - Static variable in class hdf.view.Tools
MAX_INT8 - Static variable in class hdf.view.Tools
MAX_RECENT_FILES - Static variable in class hdf.view.ViewProperties
  the maximum number of most recent files
MAX_UINT16 - Static variable in class hdf.view.Tools
MAX_UINT32 - Static variable in class hdf.view.Tools
MAX_UINT64 - Static variable in class hdf.view.Tools
MAX_UINT8 - Static variable in class hdf.view.Tools
maxDims - Variable in class hdf.object.Dataset
  The max dimension sizes of the dataset
memberDims - Variable in class hdf.object.Attribute
  The dimension sizes of each member.
memberDims - Variable in class hdf.object.CompoundDS
  The dimension sizes of each member.
memberNames - Variable in class hdf.object.Attribute
  The names of the members of the compound attribute.
memberNames - Variable in class hdf.object.CompoundDS
  The names of members of the compound dataset.
memberOrders - Variable in class hdf.object.Attribute
  Array containing the total number of elements of the members of this compound attribute.
memberOrders - Variable in class hdf.object.CompoundDS
  Returns array containing the total number of elements of the members of this compound dataset.
memberTypes - Variable in class hdf.object.Attribute
  The datatypes of the compound attribute's members.
memberTypes - Variable in class hdf.object.CompoundDS
  The datatypes of compound members.
METADATA - Enum constant in enum class hdf.view.ViewProperties.DataViewType
MetaDataContainer - Interface in hdf.object
  An interface that provides general I/O operations for object metadata attached to an object.
MetaDataView - Interface in hdf.view.MetaDataView
  The metadata view interface for displaying metadata information
MetaDataViewFactory - Class in hdf.view.MetaDataView
MetaDataViewFactory() - Constructor for class hdf.view.MetaDataView.MetaDataViewFactory

## N

namedChoice - Variable in class hdf.view.dialog.NewDataObjectDialog
  The Choice of the datatypes
namedList - Variable in class hdf.view.dialog.NewDataObjectDialog
nameField - Variable in class hdf.view.dialog.NewDatasetDialog
  TextField for entering the name of the object
nameField - Variable in class hdf.view.dialog.NewDatatypeDialog
  TextField for entering the name of the object
NATIVE - Static variable in class hdf.object.Datatype
  The default definition for datatype size, order, and sign.
nativeType - Variable in class hdf.object.nc2.NC2Datatype
NC2Attribute - Class in hdf.object.nc2
  An attribute is a (name, value) pair of metadata attached to a primary data object such as a dataset, group or named datatype.
NC2Attribute(HObject, String, Datatype, long[]) - Constructor for class hdf.object.nc2.NC2Attribute
  Create an attribute with specified name, data type and dimension sizes.
NC2Attribute(HObject, String, Datatype, long[], Object) - Constructor for class hdf.object.nc2.NC2Attribute
  Create an attribute with specific name and value.
NC2Dataset - Class in hdf.object.nc2
  NC2Dataset describes an multi-dimension array of HDF5 scalar or atomic data types, such as byte, int, short, long, float, double and string, and operations performed on the scalar dataset
NC2Dataset(FileFormat, Variable, long[]) - Constructor for class hdf.object.nc2.NC2Dataset
  Constructs an NC2Dataset object with specific netcdf variable.
NC2Datatype - Class in hdf.object.nc2
  Datatype encapsulates information of a datatype.
NC2Datatype(int, int, int, int) - Constructor for class hdf.object.nc2.NC2Datatype
  Create an Datatype with specified class, size, byte order and sign.
NC2Datatype(DataType) - Constructor for class hdf.object.nc2.NC2Datatype
  Constructs a NC2Datatype with a given NetCDF3 native datatype object.
NC2File - Class in hdf.object.nc2
  This class provides file level APIs.
NC2File() - Constructor for class hdf.object.nc2.NC2File
  Constructs an empty NC2File with read-only access.
NC2File(String) - Constructor for class hdf.object.nc2.NC2File
  Creates an NC2File object of given file name with read-only access.
NC2Group - Class in hdf.object.nc2
  An NC2Group represents NetCDF3 group, inheriting from Group.
NC2Group(FileFormat, String, String, Group, long[]) - Constructor for class hdf.object.nc2.NC2Group
  Constructs an NC2 group with specific name, path, and parent.
netcdfAttributeString(int) - Method in class hdf.object.nc2.NC2Group
netcdfDimensionString(int) - Method in class hdf.object.nc2.NC2Group
netCDFGroup - Variable in class hdf.object.nc2.NC2Group
  The corresponding netcdf Group for this group.
netcdfTypedefString(int) - Method in class hdf.object.nc2.NC2Group
NewAttributeDialog - Class in hdf.view.dialog
  NewAttributeDialog displays components for adding a new attribute.
NewAttributeDialog(Shell, HObject, List<HObject>) - Constructor for class hdf.view.dialog.NewAttributeDialog
  Constructs a NewAttributeDialog with specified object (dataset, group, or image) for the new attribute to be attached to.
NewCompoundDatasetDialog - Class in hdf.view.dialog
  NewCompoundDatasetDialog shows a message dialog requesting user input for creating a new HDF4/5 compound dataset.
NewCompoundDatasetDialog(Shell, Group, List<?>) - Constructor for class hdf.view.dialog.NewCompoundDatasetDialog
  Constructs a NewDatasetDialog with specified list of possible parent groups.
NewDataObjectDialog - Class in hdf.view.dialog
  NewDataDialog is an intermediate class for creating data types.
NewDataObjectDialog(Shell, HObject, List<?>) - Constructor for class hdf.view.dialog.NewDataObjectDialog
NewDatasetDialog - Class in hdf.view.dialog
  NewDatasetDialog shows a message dialog requesting user input for creating a new HDF4/5 dataset.
NewDatasetDialog(Shell, Group, List<?>) - Constructor for class hdf.view.dialog.NewDatasetDialog
  Constructs a NewDatasetDialog with specified list of possible parent groups.
NewDatasetDialog(Shell, Group, List<?>, DataView) - Constructor for class hdf.view.dialog.NewDatasetDialog
  Constructs a NewDatasetDialog with specified list of possible parent groups.
NewDatatypeDialog - Class in hdf.view.dialog
  NewDatatypeDialog shows a message dialog requesting user input for creating a new HDF5 datatype.
NewDatatypeDialog(Shell, Group, List<?>) - Constructor for class hdf.view.dialog.NewDatatypeDialog
  Constructs a NewDatatypeDialog with specified list of possible parent groups.
NewGroupDialog - Class in hdf.view.dialog
  NewGroupDialog shows a message dialog requesting user input for creating a new HDF4/5 group.
NewGroupDialog(Shell, Group, List<?>) - Constructor for class hdf.view.dialog.NewGroupDialog
  Constructs a NewGroupDialog with specified list of possible parent groups.
NewImageDialog - Class in hdf.view.dialog
  NewImageDialog shows a message dialog requesting user input for creating a new HDF4/5 Image.
NewImageDialog(Shell, Group, List<?>) - Constructor for class hdf.view.dialog.NewImageDialog
  Constructs a NewImageDialog with specified list of possible parent groups.
newInstance(Class<?>, Object[]) - Static method in class hdf.view.Tools
  Create and initialize a new instance of the given class.
NewLinkDialog - Class in hdf.view.dialog
  NewLinkDialog shows a message dialog requesting user input for creating new links.
NewLinkDialog(Shell, Group, List<?>, List<FileFormat>) - Constructor for class hdf.view.dialog.NewLinkDialog
  Constructs a NewLinkDialog with specified list of possible parent groups.
newObject - Variable in class hdf.view.dialog.NewDataObjectDialog
  the object created
NewshowObjRefData(long) - Method in class hdf.view.TableView.DefaultBaseTableView
  Display data pointed to by object references.
NewshowRegRefData(String) - Method in class hdf.view.TableView.DefaultBaseTableView
  Display data pointed to by region references.
nMembersInFile - Variable in class hdf.object.Group
  Total number of members of this group in file.
normalFormat - Variable in class hdf.view.TableView.DefaultBaseTableView
nPoints - Variable in class hdf.object.Dataset
  The number of data points in the memory buffer.
NSGN - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
nullStr - Static variable in class hdf.view.TableView.DataFactoryUtils
numberFormat - Variable in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter
numberFormat - Variable in class hdf.view.TableView.DefaultBaseTableView
numberOfMembers - Variable in class hdf.object.Attribute
  The number of members of the compound attribute.
numberOfMembers - Variable in class hdf.object.CompoundDS
  The number of members of the compound dataset.
numberOfPoints - Variable in class hdf.view.Chart
  number of data points

## O

OBJECT - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY
objList - Variable in class hdf.view.dialog.NewDataObjectDialog
oid - Variable in class hdf.object.HObject
  Array of long integer storing unique identifier for the object.
open() - Method in class hdf.object.Attribute
open() - Method in class hdf.object.Datatype
  Opens access to this named datatype.
open() - Method in class hdf.object.FileFormat
  Opens file and returns a file identifier.
open() - Method in class hdf.object.fits.FitsDataset
open() - Method in class hdf.object.fits.FitsFile
open() - Method in class hdf.object.fits.FitsGroup
open() - Method in class hdf.object.h4.H4Attribute
open() - Method in class hdf.object.h4.H4File
open() - Method in class hdf.object.h4.H4GRImage
open() - Method in class hdf.object.h4.H4Group
open() - Method in class hdf.object.h4.H4SDS
open() - Method in class hdf.object.h4.H4Vdata
open() - Method in class hdf.object.h5.H5Attribute
open() - Method in class hdf.object.h5.H5CompoundDS
open() - Method in class hdf.object.h5.H5Datatype
  Opens access to a named datatype.
open() - Method in class hdf.object.h5.H5File
  Opens file and returns a file identifier.
open() - Method in class hdf.object.h5.H5Group
open() - Method in class hdf.object.h5.H5Link
open() - Method in class hdf.object.h5.H5ScalarDS
open() - Method in class hdf.object.HObject
  Opens an existing object such as a dataset or group for access.
open() - Method in class hdf.object.nc2.NC2Attribute
open() - Method in class hdf.object.nc2.NC2Dataset
open() - Method in class hdf.object.nc2.NC2File
open() - Method in class hdf.object.nc2.NC2Group
open() - Method in class hdf.view.Chart
open() - Method in class hdf.view.dialog.DataOptionDialog
open() - Method in class hdf.view.dialog.ImageConversionDialog
open() - Method in class hdf.view.dialog.InputDialog
  Opens the InputDialog and returns the user's input when the dialog closes.
open() - Method in class hdf.view.dialog.MathConversionDialog
open() - Method in class hdf.view.dialog.NewAttributeDialog
open() - Method in class hdf.view.dialog.NewCompoundDatasetDialog
open() - Method in class hdf.view.dialog.NewDatasetDialog
open() - Method in class hdf.view.dialog.NewDatatypeDialog
open() - Method in class hdf.view.dialog.NewGroupDialog
open() - Method in class hdf.view.dialog.NewImageDialog
open() - Method in class hdf.view.dialog.NewLinkDialog
open(int...) - Method in class hdf.object.FileFormat
  Opens file and returns a file identifier.
open(int...) - Method in class hdf.object.h5.H5File
  Opens file and returns a file identifier.
open(long) - Method in class hdf.object.h5.H5File
  Opens a file with specific file access property list.
open(String, int) - Method in class hdf.object.FileFormat
  Deprecated.
  As of 2.4, replaced by `FileFormat.createInstance(String, int)` The replacement method has identical functionality and a more descriptive name. Since open is used elsewhere to perform a different function this method has been deprecated.
OPEN_NEW - Static variable in class hdf.object.FileFormat
  File first time access flag for open file.
openFile(String, int) - Method in class hdf.view.TreeView.DefaultTreeView
  Opens a file and retrieves the file structure of the file.
openFile(String, int) - Method in interface hdf.view.TreeView.TreeView
  Opens a file and retrieves the file structure of the file.
openMainWindow(List<File>, int, int, int, int) - Method in class hdf.view.HDFView
  Creates HDFView with a given size, and opens the given files in the viewer.
ORDER_BE - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
ORDER_LE - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
ORDER_NONE - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
ORDER_VAX - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
org.hdfgroup.hdfview - module org.hdfgroup.hdfview
org.hdfgroup.object - module org.hdfgroup.object
ORIGIN_LL - Static variable in class hdf.view.ViewProperties
  image origin: LowerLeft
ORIGIN_LR - Static variable in class hdf.view.ViewProperties
  image origin: LowerRight
ORIGIN_UL - Static variable in class hdf.view.ViewProperties
  image origin: UpperLeft
ORIGIN_UR - Static variable in class hdf.view.ViewProperties
  image origin: UpperRight
originalBuf - Variable in class hdf.object.Dataset
  The data buffer that contains the raw data directly reading from file (before any data conversion).
originalFormatClass - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

## P

palette - Variable in class hdf.object.ScalarDS
  The indexed RGB color model with 256 colors.
palette - Variable in class hdf.view.PaletteView.DefaultPaletteView
PALETTE - Enum constant in enum class hdf.view.ViewProperties.DataViewType
PaletteView - Interface in hdf.view.PaletteView
  The palette view interface for displaying image palette
PaletteViewFactory - Class in hdf.view.PaletteView
PaletteViewFactory() - Constructor for class hdf.view.PaletteView.PaletteViewFactory
parent - Variable in class hdf.object.Group
  The parent group where this group is located.
parentObj - Variable in class hdf.view.dialog.NewDataObjectDialog
  the object which the this object is attached
parentObject - Variable in class hdf.object.Attribute
  The HObject to which this Attribute is attached
performDefaults() - Method in class hdf.view.dialog.UserOptionsGeneralPage
  Performs special processing when this page's Defaults button has been pressed.
performDefaults() - Method in class hdf.view.dialog.UserOptionsHDFPage
  Performs special processing when this page's Defaults button has been pressed.
performDefaults() - Method in class hdf.view.dialog.UserOptionsViewModulesPage
  Performs special processing when this page's Defaults button has been pressed.
performOk() - Method in class hdf.view.dialog.UserOptionsGeneralPage
  Notifies that the OK button of this page's container has been pressed.
performOk() - Method in class hdf.view.dialog.UserOptionsHDFPage
  Notifies that the OK button if this page's container has been pressed.
performOk() - Method in class hdf.view.dialog.UserOptionsViewModulesPage
  Notifies that the OK button of this page's container has been pressed.
physicalLocationToBufIndex(int, int) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

## R

rank - Variable in class hdf.object.Dataset
  The number of dimensions of the dataset.
rank - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
read() - Method in class hdf.object.Attribute
read() - Method in interface hdf.object.DataFormat
  Reads the data from file.
read() - Method in class hdf.object.fits.FitsDataset
read() - Method in class hdf.object.h4.H4GRImage
read() - Method in class hdf.object.h4.H4SDS
read() - Method in class hdf.object.h4.H4Vdata
read() - Method in class hdf.object.h5.H5CompoundDS
read() - Method in class hdf.object.h5.H5ScalarDS
  Reads the data from file.
read() - Method in class hdf.object.nc2.NC2Dataset
READ - Enum constant in enum class hdf.object.h5.H5CompoundDS.IO_TYPE
READ - Enum constant in enum class hdf.object.h5.H5ScalarDS.IO_TYPE
READ - Static variable in class hdf.object.FileFormat
  File access flag for read-only permission.
readBytes() - Method in class hdf.object.Attribute
readBytes() - Method in class hdf.object.Dataset
  Reads the raw data of the dataset from file to a byte array.
readBytes() - Method in class hdf.object.fits.FitsDataset
readBytes() - Method in class hdf.object.h4.H4GRImage
readBytes() - Method in class hdf.object.h4.H4SDS
readBytes() - Method in class hdf.object.h4.H4Vdata
readBytes() - Method in class hdf.object.h5.H5CompoundDS
readBytes() - Method in class hdf.object.h5.H5ScalarDS
readBytes() - Method in class hdf.object.nc2.NC2Dataset
READONLY - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY
readPalette(int) - Method in class hdf.object.fits.FitsDataset
readPalette(int) - Method in class hdf.object.h4.H4GRImage
readPalette(int) - Method in class hdf.object.h4.H4SDS
readPalette(int) - Method in class hdf.object.h5.H5ScalarDS
readPalette(int) - Method in class hdf.object.nc2.NC2Dataset
  read specific image palette from file.
readPalette(int) - Method in class hdf.object.ScalarDS
  Reads a specific image palette from file.
readPalette(String) - Static method in class hdf.view.Tools
  read an image palette from a file.
RefContextMenu(NatTable) - Constructor for class hdf.view.TableView.DefaultBaseTableView.RefContextMenu
refObject - Variable in class hdf.view.dialog.NewDataObjectDialog
  the object referenced
reloadTree(Group) - Method in class hdf.object.h5.H5File
  reload the sub-tree structure from file.
removeDataView(DataView) - Method in interface hdf.view.DataView.DataViewManager
  Data content is closed, remove the dataview from the main window
removeDataView(DataView) - Method in class hdf.view.HDFView
removeFileFormat(String) - Static method in class hdf.object.FileFormat
  Removes a FileFormat from the list of supported formats.
removeFromMemberList(HObject) - Method in class hdf.object.Group
  Removes an object from the member list of this group in memory.
removeMetadata(Object) - Method in class hdf.object.Attribute
removeMetadata(Object) - Method in class hdf.object.Datatype
removeMetadata(Object) - Method in class hdf.object.fits.FitsDataset
removeMetadata(Object) - Method in class hdf.object.fits.FitsGroup
  Deletes an attribute from this dataset.
removeMetadata(Object) - Method in class hdf.object.h4.H4GRImage
removeMetadata(Object) - Method in class hdf.object.h4.H4Group
removeMetadata(Object) - Method in class hdf.object.h4.H4SDS
removeMetadata(Object) - Method in class hdf.object.h4.H4Vdata
removeMetadata(Object) - Method in class hdf.object.h5.H5CompoundDS
removeMetadata(Object) - Method in class hdf.object.h5.H5Datatype
removeMetadata(Object) - Method in class hdf.object.h5.H5Group
removeMetadata(Object) - Method in class hdf.object.h5.H5Link
removeMetadata(Object) - Method in class hdf.object.h5.H5ScalarDS
removeMetadata(Object) - Method in interface hdf.object.MetaDataContainer
  Deletes an existing piece of metadata from this object.
removeMetadata(Object) - Method in class hdf.object.nc2.NC2Dataset
removeMetadata(Object) - Method in class hdf.object.nc2.NC2Group
  Deletes an attribute from this dataset.
renameAttribute(HObject, String, String) - Method in class hdf.object.FileFormat
  Renames an attribute.
renameAttribute(HObject, String, String) - Method in class hdf.object.h5.H5File
  Renames an attribute.
renameObject(HObject, String) - Static method in class hdf.object.h5.H5File
  Rename the given object
renameObject(HObject, String, String) - Static method in class hdf.object.h5.H5File
  Rename the given object
reopenFile(FileFormat, int) - Method in class hdf.view.TreeView.DefaultTreeView
reopenFile(FileFormat, int) - Method in interface hdf.view.TreeView.TreeView
resetSelection() - Method in class hdf.object.Attribute
rootDir - Variable in class hdf.view.dialog.UserOptionsDefaultPage
rootDir - Variable in class hdf.view.dialog.UserOptionsDialog
ROTATE_CCW_90 - Static variable in class hdf.view.ImageView.DefaultImageView
  ROTATE IMAGE COUNTER CLOCKWISE 90 DEGREE.
ROTATE_CW_90 - Static variable in class hdf.view.ImageView.DefaultImageView
  ROTATE IMAGE 90 DEGREE CLOCKWISE.
Rotate90Filter(int) - Constructor for class hdf.view.ImageView.DefaultImageView.Rotate90Filter
rowCount - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
RowHeader(IUniqueIndexLayer, ILayer, SelectionLayer) - Constructor for class hdf.view.TableView.DefaultBaseTableView.RowHeader
rowHeaderDataProvider - Variable in class hdf.view.TableView.DefaultBaseTableView
RowHeaderDataProvider(DataFormat) - Constructor for class hdf.view.TableView.DefaultBaseTableView.RowHeaderDataProvider
runMainWindow() - Method in class hdf.view.HDFView

## S

save() - Method in class hdf.view.ViewProperties
  Save user properties into property file
saveAsBinary() - Method in class hdf.view.TableView.DefaultBaseTableView
  Save data as binary.
saveAsBinary(DataOutputStream, Object, ByteOrder) - Static method in class hdf.view.Tools
saveAsText() - Method in class hdf.view.TableView.DefaultBaseTableView
  Save data as text.
saveFile(FileFormat) - Method in class hdf.view.TreeView.DefaultTreeView
  Save a file
saveFile(FileFormat) - Method in interface hdf.view.TreeView.TreeView
  save a file
saveImageAs(BufferedImage, File, String) - Static method in class hdf.view.Tools
  Save a BufferedImage into an image file.
ScalarDS - Class in hdf.object
  A scalar dataset is a multiple dimension array of scalar points.
ScalarDS(FileFormat, String, String) - Constructor for class hdf.object.ScalarDS
  Constructs an instance of a ScalarDS with specific name and path.
ScalarDS(FileFormat, String, String, long[]) - Constructor for class hdf.object.ScalarDS
  Deprecated.
  Not for public use in the future.
  Using `ScalarDS(FileFormat, String, String)`
scientificFormat - Variable in class hdf.view.TableView.DefaultBaseTableView
selectedDims - Variable in class hdf.object.Dataset
  Array that contains the number of data points selected (for read/write) in each dimension.
selectedIndex - Variable in class hdf.object.Dataset
  Array that contains the indices of the dimensions selected for display.
selectedStride - Variable in class hdf.object.Dataset
  The number of elements to move from the start location in each dimension.
selectHyperslab(long, long[], long[], long[], long[], long[]) - Static method in class hdf.object.h5.H5Utils
  Set up a hyperslab selection within a dataset.
selectionLayer - Variable in class hdf.view.TableView.DefaultBaseTableView
selectMember(int) - Method in class hdf.object.Attribute
  Selects the i-th member for read/write.
selectMember(int) - Method in interface hdf.object.CompoundDataFormat
  Selects the i-th member for read/write.
selectMember(int) - Method in class hdf.object.CompoundDS
  Selects the i-th member for read/write.
SEPARATOR - Static variable in class hdf.object.CompoundDS
  A single character to separate the names of nested compound fields.
SEPARATOR - Static variable in class hdf.object.HObject
  The separator of object path, i.e.
setAllMemberSelection(boolean) - Method in class hdf.object.Attribute
  Selects/deselects all members.
setAllMemberSelection(boolean) - Method in interface hdf.object.CompoundDataFormat
  Selects/deselects all members.
setAllMemberSelection(boolean) - Method in class hdf.object.CompoundDS
  Selects/deselects all members.
setAutoContrast(boolean) - Static method in class hdf.view.ViewProperties
  Set the flag to indicate if auto contrast is used in image process.
setColorModel(ColorModel) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter
setConvertByteToString(boolean) - Method in class hdf.object.Dataset
  Sets the flag that indicates if a byte array is converted to a string array.
setConvertEnum(boolean) - Method in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter
setConvertEnum(boolean) - Static method in class hdf.view.ViewProperties
setData(Object) - Method in interface hdf.object.DataFormat
setData(Object) - Method in class hdf.object.Dataset
  Not for public use in the future.
setDataDelimiter(String) - Static method in class hdf.view.ViewProperties
  set the delimiter of data values
setDataValue(int, int, Object) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
setDataValue(int, int, Object) - Method in class hdf.view.TableView.DefaultBaseTableView.RowHeaderDataProvider
setDataValue(int, int, Object, Object) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
setDataValue(int, Object, Object) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
setDefaultDisplayMode(boolean) - Method in class hdf.view.TreeView.DefaultTreeView
  change the display option.
setDefaultDisplayMode(boolean) - Method in interface hdf.view.TreeView.TreeView
  change the display option.
setDescription(String) - Method in class hdf.view.DefaultFileFilter
  Sets the human readable description of this filter.
setDimensions(int, int) - Method in class hdf.view.ImageView.DefaultImageView.FlipFilter
setDimensions(int, int) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter
setEarlyLib(String) - Static method in class hdf.view.ViewProperties
  Set the value of default lib version for the earliest.
setEnumMembers(String) - Method in class hdf.object.Datatype
  Sets the (key, value) pairs of enum members for enum datatype.
setExtensionListInDescription(boolean) - Method in class hdf.view.DefaultFileFilter
  Determines whether the extension list (.jpg, .gif, etc) should show up in the human readable description.
setFileExtension(String) - Static method in class hdf.view.ViewProperties
  set the file extension
setFontSize(int) - Static method in class hdf.view.ViewProperties
  sets the font size
setFontType(String) - Static method in class hdf.view.ViewProperties
  sets the font type
setFullname(String, String) - Method in class hdf.object.h5.H5Datatype
setFullname(String, String) - Method in class hdf.object.HObject
setH4toH5(String) - Static method in class hdf.view.ViewProperties
  set the path of the H4 to H5 converter
setHDF5UserBlock(String, String, byte[]) - Static method in class hdf.view.Tools
  Write HDF5 user block data into byte array.
setHints(int) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter
setImage(Image) - Method in class hdf.view.ImageView.DefaultImageView
setImage(Image) - Method in interface hdf.view.ImageView.ImageView
  Sets the image
setImageDataRange(double, double) - Method in class hdf.object.ScalarDS
  Sets data range for an image.
setImageOrigin(String) - Static method in class hdf.view.ViewProperties
  set the image origin
setIndexBase1(boolean) - Static method in class hdf.view.ViewProperties
  Set the flag to indicate if IndexBase should start at 1.
setIndexOrder(int) - Method in class hdf.object.FileFormat
setIndexOrder(int) - Method in class hdf.object.h4.H4File
setIndexOrder(int) - Method in class hdf.object.h5.H5File
setIndexOrder(String) - Static method in class hdf.view.ViewProperties
  set the index order
setIndexType(int) - Method in class hdf.object.FileFormat
setIndexType(int) - Method in class hdf.object.h4.H4File
setIndexType(int) - Method in class hdf.object.h5.H5File
setIndexType(String) - Static method in class hdf.view.ViewProperties
  set the index type
setIsImage(boolean) - Method in class hdf.object.ScalarDS
  Sets the flag to indicate this dataset is an image.
setIsImageDisplay(boolean) - Method in class hdf.object.ScalarDS
  Sets the flag to display the dataset as an image.
setIsValueChanged(boolean) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
setLateLib(String) - Static method in class hdf.view.ViewProperties
  Set the value of default lib version for the latest.
setLibBounds(String, String) - Method in class hdf.object.FileFormat
  Sets the bounds of library versions.
setLibBounds(String, String) - Method in class hdf.object.h5.H5File
  Sets the bounds of library versions.
setLineColors(int[]) - Method in class hdf.view.Chart
  Sets the color of each line of a line plot
setLineLabels(String[]) - Method in class hdf.view.Chart
  Sets the labels of each line.
setLinkTargetObjName(String) - Method in class hdf.object.HObject
  Sets the name of the target object that is linked to.
setMaxMembers(int) - Method in class hdf.object.FileFormat
  Sets the maximum number of objects to be loaded into memory.
setMaxMembers(int) - Static method in class hdf.view.ViewProperties
  Current Java applications such as HDFView cannot handle files with large number of objects such as 1,000,000 objects.
setName(String) - Method in class hdf.object.fits.FitsDataset
setName(String) - Method in class hdf.object.Group
  Sets the name of the group.
setName(String) - Method in class hdf.object.h5.H5CompoundDS
setName(String) - Method in class hdf.object.h5.H5Datatype
setName(String) - Method in class hdf.object.h5.H5Group
setName(String) - Method in class hdf.object.h5.H5Link
setName(String) - Method in class hdf.object.h5.H5ScalarDS
setName(String) - Method in class hdf.object.HObject
  Sets the name of the object.
setName(String) - Method in class hdf.object.nc2.NC2Dataset
  Sets the name of the data object.
setNetCDFGroup(Group) - Method in class hdf.object.nc2.NC2Group
setNewLibBounds(String, String) - Method in class hdf.object.FileFormat
  Sets the bounds of new library versions.
setNewLibBounds(String, String) - Method in class hdf.object.h4.H4File
setNewLibBounds(String, String) - Method in class hdf.object.h5.H5File
  Sets the bounds of new library versions.
setNumberFormat(NumberFormat) - Method in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter
setPalette(byte[][]) - Method in class hdf.object.ScalarDS
  Sets the palette for this dataset.
setPalette(byte[][]) - Method in class hdf.view.ImageView.DefaultImageView
setPalette(byte[][]) - Method in interface hdf.view.ImageView.ImageView
  Sets the image palette
setParentObject(HObject) - Method in class hdf.object.Attribute
  Sets the HObject to which this Attribute is "attached".
setPath(String) - Method in class hdf.object.h5.H5Group
setPath(String) - Method in class hdf.object.HObject
  Sets the path of the object.
setPixels(int, int, int, int, ColorModel, byte[], int, int) - Method in class hdf.view.ImageView.DefaultImageView.FlipFilter
setPixels(int, int, int, int, ColorModel, byte[], int, int) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter
setPixels(int, int, int, int, ColorModel, int[], int, int) - Method in class hdf.view.ImageView.DefaultImageView.FlipFilter
setPixels(int, int, int, int, ColorModel, int[], int, int) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter
setProperties(Hashtable) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter
setProperty(String, Object) - Method in class hdf.object.Attribute
  set a property for the attribute.
setReadOnly(boolean) - Static method in class hdf.view.ViewProperties
  Set the flag to indicate if default file access is read only.
setRecentFiles(ArrayList<String>) - Static method in class hdf.view.ViewProperties
  Sets the list of most recently accessed files.
setRootDir(String) - Static method in class hdf.view.ViewProperties
  set the path of the default root directory
setShowAsBin(boolean) - Method in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter
setShowAsHex(boolean) - Method in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter
setShowImageValue(boolean) - Static method in class hdf.view.ViewProperties
  Set the flag to indicate if "show image values" is set.
setShowRegRefValue(boolean) - Static method in class hdf.view.ViewProperties
  Set the flag to indicate if "show RegRef values" is set.
setStartMembers(int) - Method in class hdf.object.FileFormat
  Sets the starting index of objects to be loaded into memory.
setStartMembers(int) - Static method in class hdf.view.ViewProperties
  Current Java applications such as HDFView cannot handle files with large number of objects such as 1,000,000 objects.
setTestState(boolean) - Method in class hdf.view.HDFView
  Set the testing state that determines if HDFView is being executed for GUI testing.
setTypeToInteger() - Method in class hdf.view.Chart
  Sets the data type of the plot data to be integer.
setUsersGuide(String) - Static method in class hdf.view.ViewProperties
  set the path of H5View User's guide
setWorkDir(String) - Static method in class hdf.view.ViewProperties
  set the path of the default work directory
shell - Variable in class hdf.view.dialog.NewDataObjectDialog
shell - Variable in class hdf.view.dialog.UserOptionsDefaultPage
shell - Variable in class hdf.view.TableView.DefaultBaseTableView
show() - Method in interface hdf.view.HelpView.HelpView
  Display help information
showAsBin - Variable in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter
showAsBin - Variable in class hdf.view.TableView.DefaultBaseTableView
showAsHex - Variable in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter
showAsHex - Variable in class hdf.view.TableView.DefaultBaseTableView
showConfirm(Shell, String, String) - Static method in class hdf.view.Tools
  Show an SWT Confirm dialog with the given message.
showDataContent(HObject) - Method in class hdf.view.TreeView.DefaultTreeView
  Display the content of a data object.
showDataContent(HObject) - Method in interface hdf.view.TreeView.TreeView
  Display the content of a data object.
showError(String) - Method in interface hdf.view.DataView.DataViewManager
  Display error message
showError(String) - Method in class hdf.view.HDFView
  Display error message
showError(Shell, String, String) - Static method in class hdf.view.Tools
  Show an SWT error dialog with the given error message.
showImageValues() - Static method in class hdf.view.ViewProperties
  Returns true if "show image values" is set.
showInformation(Shell, String, String) - Static method in class hdf.view.Tools
  Show an SWT Information dialog with the given message.
showMetaData(HObject) - Method in class hdf.view.HDFView
showMetaData(HObject) - Method in class hdf.view.TreeView.DefaultTreeView
  Displays the meta data of a data object.
showMetaData(HObject) - Method in interface hdf.view.TreeView.TreeView
  Displays the meta data of a data object.
showObjRefData(long) - Method in class hdf.view.TableView.DefaultBaseTableView
showObjRefData(long) - Method in class hdf.view.TableView.DefaultCompoundDSTableView
showObjRefData(long) - Method in class hdf.view.TableView.DefaultScalarDSTableView
  Display data pointed to by object references.
showRegRefData(String) - Method in class hdf.view.TableView.DefaultBaseTableView
showRegRefData(String) - Method in class hdf.view.TableView.DefaultCompoundDSTableView
showRegRefData(String) - Method in class hdf.view.TableView.DefaultScalarDSTableView
  Display data pointed to by region references.
showRegRefValues() - Static method in class hdf.view.ViewProperties
  Returns true if "show regref values" is set.
showStatus(String) - Method in interface hdf.view.DataView.DataViewManager
  Display feedback message
showStatus(String) - Method in class hdf.view.HDFView
  Display feedback message.
showWarning(Shell, String, String) - Static method in class hdf.view.Tools
  Show an SWT Warning dialog with the given message.
SIGN_2 - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
SIGN_NONE - Static variable in class hdf.object.Datatype
  See HDF5 User's Guide
sizeChoice - Variable in class hdf.view.dialog.NewDataObjectDialog
start - Variable in class hdf.view.TableView.DefaultBaseTableView.RowHeaderDataProvider
startDims - Variable in class hdf.object.Dataset
  The starting position of each dimension of a selected subset.
storage - Variable in class hdf.object.Dataset
  The storage information.
storageLayout - Variable in class hdf.object.Dataset
  The storage layout information.
strEnumMap - Variable in class hdf.view.dialog.NewDataObjectDialog
stride - Variable in class hdf.view.TableView.DefaultBaseTableView.RowHeaderDataProvider
stringToByte(String[], int) - Static method in class hdf.object.Dataset
  Converts a string array into an array of bytes for a fixed string dataset.

## T

TABLE - Enum constant in enum class hdf.view.TableView.DefaultBaseTableView.ViewType
TABLE - Enum constant in enum class hdf.view.ViewProperties.DataViewType
TableView - Interface in hdf.view.TableView
  The table view interface for displaying data in table form
TableViewFactory - Class in hdf.view.TableView
TableViewFactory() - Constructor for class hdf.view.TableView.TableViewFactory
tclass - Variable in class hdf.view.dialog.NewDataObjectDialog
  The attributes of the datatype
theValue - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
throwValidationFailedException(int, int, Object, String) - Method in class hdf.view.TableView.DataValidatorFactory.HDFDataValidator
toBinaryString(long, int) - Static method in class hdf.view.Tools
  Returns a string representation of the long argument as an unsigned integer in base 2.
toBinaryString(BigDecimal, int) - Static method in class hdf.view.Tools
toBinaryString(BigInteger, int) - Static method in class hdf.view.Tools
toBufferedImage(Image) - Static method in class hdf.view.Tools
  This method returns a buffered image with the contents of an image.
toHexString(long, int) - Static method in class hdf.view.Tools
  Returns a string representation of the long argument as an unsigned integer in base 16.
toHexString(BigDecimal, int) - Static method in class hdf.view.Tools
toHexString(BigInteger, int) - Static method in class hdf.view.Tools
  Returns a string representation of the BigInteger argument as an unsigned integer in base 16.
toNative(long) - Static method in class hdf.object.h5.H5Datatype
Tools - Class in hdf.view
  The "Tools" class contains various tools for HDF files such as jpeg to HDF converter.
Tools() - Constructor for class hdf.view.Tools
torder - Variable in class hdf.view.dialog.NewDataObjectDialog
toString() - Method in class hdf.object.Datatype
toString() - Method in class hdf.object.HObject
  Returns the name of the object.
toString(String) - Method in class hdf.object.Attribute
  Returns a string representation of the data value of the attribute.
toString(String, int) - Method in class hdf.object.Attribute
  Returns a string representation of the data value of the attribute.
transform(double, double, double[]) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter
transformBBox(Rectangle) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter
TRANSPOSED - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY
TreeView - Interface in hdf.view.TreeView
  TreeView defines APIs for opening a file and displaying the file structure in a tree structure.
TREEVIEW - Enum constant in enum class hdf.view.ViewProperties.DataViewType
TreeViewFactory - Class in hdf.view.TreeView
TreeViewFactory() - Constructor for class hdf.view.TreeView.TreeViewFactory
tsign - Variable in class hdf.view.dialog.NewDataObjectDialog
tsize - Variable in class hdf.view.dialog.NewDataObjectDialog

## U

unsignedConverted - Variable in class hdf.object.Attribute
  Flag to indicate is the original unsigned C data is converted.
unsignedConverted - Variable in class hdf.object.ScalarDS
  Flag to indicate is the original unsigned C data is converted.
updateDataBuffer(Object) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider
updateDataConversionSettings() - Method in class hdf.view.TableView.DefaultBaseTableView
updateFont(Font) - Method in class hdf.view.TreeView.DefaultTreeView
updateItemIcon(HObject) - Method in class hdf.view.TreeView.DefaultTreeView
  Updates the icon for the TreeItem representing the given HObject.
updateMetadata(Object) - Method in class hdf.object.Attribute
updateMetadata(Object) - Method in class hdf.object.Datatype
updateMetadata(Object) - Method in class hdf.object.fits.FitsDataset
updateMetadata(Object) - Method in class hdf.object.fits.FitsGroup
updateMetadata(Object) - Method in class hdf.object.h4.H4GRImage
updateMetadata(Object) - Method in class hdf.object.h4.H4Group
updateMetadata(Object) - Method in class hdf.object.h4.H4SDS
updateMetadata(Object) - Method in class hdf.object.h4.H4Vdata
updateMetadata(Object) - Method in class hdf.object.h5.H5CompoundDS
updateMetadata(Object) - Method in class hdf.object.h5.H5Group
updateMetadata(Object) - Method in class hdf.object.h5.H5Link
updateMetadata(Object) - Method in class hdf.object.h5.H5ScalarDS
updateMetadata(Object) - Method in interface hdf.object.MetaDataContainer
  Updates an existing piece of metadata attached to this object.
updateMetadata(Object) - Method in class hdf.object.nc2.NC2Dataset
updateMetadata(Object) - Method in class hdf.object.nc2.NC2Group
updateReferenceDataset(H5File, H5File) - Static method in class hdf.object.h5.H5File
  Updates values of scalar dataset object references in copied file.
updateValueInFile() - Method in class hdf.view.TableView.DefaultBaseTableView
  Update dataset's value in file.
updateValueInFile() - Method in interface hdf.view.TableView.TableView
  Write the change of a dataset into file.
useCommittedType - Variable in class hdf.view.dialog.NewDataObjectDialog
  The Choice of the object list
UserOptionsDefaultPage - Class in hdf.view.dialog
  `UserOptionsDefaultPage` extends `PreferencePage` to display the default button images for the ok, cancel, apply and defaults button.
UserOptionsDefaultPage() - Constructor for class hdf.view.dialog.UserOptionsDefaultPage
  `UserOptionsDefaultPage` default constructor.
UserOptionsDefaultPage(String) - Constructor for class hdf.view.dialog.UserOptionsDefaultPage
  Creates a new abstract `UserOptionsDefaultPage` with the given title.
UserOptionsDefaultPage(String, ImageDescriptor) - Constructor for class hdf.view.dialog.UserOptionsDefaultPage
  Creates a new abstract `UserOptionsDefaultPage` with the given title and image.
UserOptionsDialog - Class in hdf.view.dialog
  UserOptionsDialog displays components for choosing user options.
UserOptionsDialog(Shell, PreferenceManager, String) - Constructor for class hdf.view.dialog.UserOptionsDialog
UserOptionsGeneralPage - Class in hdf.view.dialog
  UserOptionsGeneralPage.java - Configuration page for general application settings.
UserOptionsGeneralPage() - Constructor for class hdf.view.dialog.UserOptionsGeneralPage
UserOptionsHDFPage - Class in hdf.view.dialog
  UserOptionsHDFPage.java - Configuration page for HDF-specific application settings.
UserOptionsHDFPage() - Constructor for class hdf.view.dialog.UserOptionsHDFPage
UserOptionsNode - Class in hdf.view.dialog
  UserOptionsDialog displays components for choosing user options.
UserOptionsNode(String) - Constructor for class hdf.view.dialog.UserOptionsNode
  Creates an `UserOptionsNode` with the given id.
UserOptionsNode(String, String, ImageDescriptor, String) - Constructor for class hdf.view.dialog.UserOptionsNode
  Creates an `UserOptionsNode` with the given id, label, and image, and lazily-loaded preference page.
UserOptionsNode(String, IPreferencePage) - Constructor for class hdf.view.dialog.UserOptionsNode
  Creates an `UserOptionsNode` with the given id and preference page.
UserOptionsViewModulesPage - Class in hdf.view.dialog
  UserOptionsViewModulesPage.java - Configuration page for user-implementable modules.
UserOptionsViewModulesPage() - Constructor for class hdf.view.dialog.UserOptionsViewModulesPage
Utils - Class in hdf.object

## V

validate(int, int, Object) - Method in class hdf.view.TableView.DataValidatorFactory.HDFDataValidator
valueOf(String) - Static method in enum class hdf.object.h5.H5CompoundDS.IO_TYPE
  Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class hdf.object.h5.H5ScalarDS.IO_TYPE
  Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class hdf.view.TableView.DefaultBaseTableView.ViewType
  Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class hdf.view.ViewProperties.BITMASK_OP
  Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class hdf.view.ViewProperties.DATA_VIEW_KEY
  Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class hdf.view.ViewProperties.DataViewType
  Returns the enum constant of this class with the specified name.
values() - Static method in enum class hdf.object.h5.H5CompoundDS.IO_TYPE
  Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class hdf.object.h5.H5ScalarDS.IO_TYPE
  Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class hdf.view.TableView.DefaultBaseTableView.ViewType
  Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class hdf.view.ViewProperties.BITMASK_OP
  Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class hdf.view.ViewProperties.DATA_VIEW_KEY
  Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class hdf.view.ViewProperties.DataViewType
  Returns an array containing the constants of this enum class, in the order they are declared.
VERSION - Static variable in class hdf.view.ViewProperties
  the version of the HDFViewer
VIEW_NAME - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY
viewer - Variable in class hdf.view.TableView.DefaultBaseTableView
viewManager - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView
ViewProperties - Class in hdf.view
ViewProperties(String, String) - Constructor for class hdf.view.ViewProperties
  Creates a property list with given root directory of the HDFView.
ViewProperties.BITMASK_OP - Enum Class in hdf.view
  Property keys control how the data is displayed.
ViewProperties.DATA_VIEW_KEY - Enum Class in hdf.view
  Property keys control how the data is displayed.
ViewProperties.DataViewType - Enum Class in hdf.view
  Used to create different DataViews for a given HObject.
viewType - Variable in class hdf.view.TableView.DefaultBaseTableView

## W

workDir - Variable in class hdf.view.dialog.UserOptionsDialog
write() - Method in interface hdf.object.DataFormat
  Writes the current memory buffer to the object in the file.
write() - Method in class hdf.object.Dataset
  Writes the memory buffer of this dataset to file.
write(Object) - Method in class hdf.object.Attribute
write(Object) - Method in interface hdf.object.DataFormat
  Writes a memory buffer to the object in the file.
write(Object) - Method in class hdf.object.fits.FitsDataset
write(Object) - Method in class hdf.object.h4.H4GRImage
write(Object) - Method in class hdf.object.h4.H4SDS
write(Object) - Method in class hdf.object.h4.H4Vdata
write(Object) - Method in class hdf.object.h5.H5CompoundDS
  Writes the given data buffer into this dataset in a file.
write(Object) - Method in class hdf.object.h5.H5ScalarDS
  Writes the given data buffer into this dataset in a file.
write(Object) - Method in class hdf.object.nc2.NC2Dataset
WRITE - Enum constant in enum class hdf.object.h5.H5CompoundDS.IO_TYPE
WRITE - Enum constant in enum class hdf.object.h5.H5ScalarDS.IO_TYPE
WRITE - Static variable in class hdf.object.FileFormat
  File access flag for read/write permission.
writeAttribute(HObject, Attribute, boolean) - Method in class hdf.object.FileFormat
  Attaches a given attribute to an object.
writeAttribute(HObject, Attribute, boolean) - Method in class hdf.object.fits.FitsFile
  Creates a new attribute and attached to the object if attribute does not exist.
writeAttribute(HObject, Attribute, boolean) - Method in class hdf.object.h4.H4File
  Creates a new attribute and attaches it to the object if the attribute does not exist.
writeAttribute(HObject, Attribute, boolean) - Method in class hdf.object.h5.H5File
writeAttribute(HObject, Attribute, boolean) - Method in class hdf.object.nc2.NC2File
writeDataToFile(FileFormat) - Method in class hdf.view.HDFView
  Write the change of data to the given file.
writeMetadata(Object) - Method in class hdf.object.Attribute
writeMetadata(Object) - Method in class hdf.object.Datatype
writeMetadata(Object) - Method in class hdf.object.fits.FitsDataset
writeMetadata(Object) - Method in class hdf.object.fits.FitsGroup
  Creates a new attribute and attached to this dataset if attribute does not exist.
writeMetadata(Object) - Method in class hdf.object.h4.H4GRImage
writeMetadata(Object) - Method in class hdf.object.h4.H4Group
writeMetadata(Object) - Method in class hdf.object.h4.H4SDS
writeMetadata(Object) - Method in class hdf.object.h4.H4Vdata
writeMetadata(Object) - Method in class hdf.object.h5.H5CompoundDS
writeMetadata(Object) - Method in class hdf.object.h5.H5Datatype
writeMetadata(Object) - Method in class hdf.object.h5.H5Group
writeMetadata(Object) - Method in class hdf.object.h5.H5Link
writeMetadata(Object) - Method in class hdf.object.h5.H5ScalarDS
writeMetadata(Object) - Method in interface hdf.object.MetaDataContainer
  Writes a specific piece of metadata (such as an attribute) into the file.
writeMetadata(Object) - Method in class hdf.object.nc2.NC2Dataset
writeMetadata(Object) - Method in class hdf.object.nc2.NC2Group
  Creates a new attribute and attached to this dataset if attribute does not exist.

## Z

zeroArrayCheck(byte[]) - Static method in class hdf.object.h5.H5Datatype
  Checks if a reference datatype is all zero.

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